Description : DNA ligase, putative

Gene families : OG_03_0002010 (OF) Phylogenetic Tree(s): OG0002010_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: EAL91408
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
CBF90206 No alias DNA ligase 4 0.03 OF
EAA33632 No alias BRCT domain 0.02 OF
EFI27358 No alias DNA ligase IV 0.02 OF
MGG_12899T0 No alias DNA ligase 4 [Source:UniProtKB/TrEMBL;Acc:G4N5E4] 0.02 OF
POW05160 No alias BRCT domain;BRCT domain;DNA ligase, ATP-dependent,... 0.02 OF
SPCC1183.05c.1 No alias DNA repair ligase Lig4 [Source:PomBase;Acc:SPCC1183.05c] 0.03 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003910 DNA ligase (ATP) activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
BP GO:0006310 DNA recombination IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001357 BRCT_dom 723 806
IPR012308 DNA_ligase_ATP-dep_N 40 249
IPR012310 DNA_ligase_ATP-dep_cent 291 514
IPR012309 DNA_ligase_ATP-dep_C 539 660
No external refs found!