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  5. EAL90722

EAL90722


Description : DNA-directed RNA polymerase I subunit (Rpa190), putative


Gene families : OG_03_0002856 (OF) Phylogenetic Tree(s): OG0002856_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EAL90722
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AFR94954 No alias DNA-directed RNA polymerase I subunit RPA1;RNA... 0.33 OF
AOA67914 No alias RNA polymerase Rpb1, domain 5 0.26 OF
CAG78195 No alias RNA polymerase Rpb1, domain 1 0.19 OF
CAK39952 No alias RNA polymerase Rpb1, domain 2 0.29 OF
EAA26770 No alias RNA polymerase Rpb1, domain 4 0.27 OF
EDN93737 No alias RNA polymerase, alpha subunit 0.26 OF
EFI27675 No alias RNA polymerase I largest subunit 0.05 OF
EJF56609 No alias RNA polymerase Rpb1, domain 3 0.12 OF
ESU08827 No alias RNA polymerase Rpb1, domain 1 0.35 OF
KHC83811 No alias DNA-directed RNA polymerase I subunit RPA1;"RNA... 0.26 OF
MGG_01158T0 No alias DNA-directed RNA polymerase I subunit RPA1... 0.03 OF
POW13373 No alias RNA polymerase Rpb1, domain 5;RNA polymerase Rpb1,... 0.19 OF
SPBC4C3.05c.1 No alias DNA-directed RNA polymerase I complex large subunit Nuc1... 0.17 OF
YOR341W No alias RNA polymerase I largest subunit A190 [Source:SGD;Acc:S000005868] 0.23 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007083 RNA_pol_Rpb1_4 904 992
IPR007081 RNA_pol_Rpb1_5 999 1627
IPR007080 RNA_pol_Rpb1_1 10 480
IPR007066 RNA_pol_Rpb1_3 665 842
IPR000722 RNA_pol_asu 482 660
No external refs found!