EAL89424

Description : snoRNP protein (gar1), putative

Gene families : OG_03_0003024 (OF) Phylogenetic Tree(s): OG0003024_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EAL89424
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AFR96989	No alias	H/ACA ribonucleoprotein complex subunit 1;Gar1/Naf1 RNA...	0.09	OF
AOA68031	No alias	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	0.07	OF
CAG82530	No alias	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	0.03	OF
CAK43999	No alias	Gar1/Naf1 RNA binding region	0.06	OF
CBF81453	No alias	snoRNP protein	0.14	OF
EAU88280	No alias	small nucleolar RNP protein	0.08	OF
EDN95099	No alias	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	0.09	OF
EGR48875	No alias	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	0.08	OF
ESA42808	No alias	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	0.14	OF
ESU12458	No alias	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	0.17	OF
KHC83896	No alias	H/ACA ribonucleoprotein complex subunit 1;Gar1/Naf1 RNA...	0.07	OF
MGG_03556T0	No alias	H/ACA ribonucleoprotein complex subunit 1...	0.03	OF
POW07597	No alias	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	0.04	OF
SPBC20F10.01.1	No alias	snoRNP pseudouridylase box H/ACA snoRNP complex protein...	0.07	OF
YHR089C	No alias	Protein component of the H/ACA snoRNP pseudouridylase...	0.07	OF

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042254	ribosome biogenesis	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007504	H/ACA_rnp_Gar1/Naf1	29	133

External Links

No external refs found!