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YGR119C


Description : FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of the nuclear pore complex (NPC) permeability barrier; found in stable complex with Nic96p and two other FG-nucleoproteins (Nsp1p and Nup49p) [Source:SGD;Acc:S000003351]


Gene families : OG_03_0002485 (OF) Phylogenetic Tree(s): OG0002485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YGR119C
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AOA70210 No alias Nucleoporin FG repeat 0.07 OF
CAG84237 No alias Nucleoporin FG repeat 0.03 OF
CAK45463 No alias NUP57/Nup54 C-terminal domain 0.03 OF
EAA35831 No alias NUP57/Nup54 C-terminal domain 0.03 OF
EAL90558 No alias nucleoporin, putative 0.05 OF
EDO01000 No alias NUP57/Nup54 C-terminal domain 0.04 OF
EGR45382 No alias Nucleoporin Nup54, alpha-helical domain 0.02 OF
ESU16146 No alias Nucleoporin Nup54, alpha-helical domain 0.05 OF
KHC71221 No alias hypothetical protein;Nucleoporin complex subunit... 0.06 OF

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025574 Nucleoporin_FG_rpt 119 193
IPR025574 Nucleoporin_FG_rpt 10 80
IPR025712 Nup54_alpha-helical_dom 327 463
No external refs found!