EAL87958


Description : DNA-directed RNA polymerase III, beta subunit, putative


Gene families : OG_03_0002674 (OF) Phylogenetic Tree(s): OG0002674_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EAL87958
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AFR97232 No alias DNA-directed RNA polymerase III subunit RPC2;RNA... 0.09 OF
AOA70175 No alias RNA polymerase Rpb2, domain 2 0.08 OF
CAG83219 No alias RNA polymerase Rpb2, domain 3 0.11 OF
CAK43742 No alias RNA polymerase Rpb2, domain 3 0.07 OF
CBF89725 No alias DNA-directed RNA polymerase III, beta subunit, putative 0.18 OF
EAA27959 No alias RNA polymerase Rpb2, domain 4 0.08 OF
EDO01279 No alias RNA polymerase Rpb2, domain 3 0.12 OF
EGR48063 No alias RNA polymerase Rpb2, domain 3 0.05 OF
EJF60120 No alias RNA polymerase beta subunit 0.02 OF
ESU06078 No alias DNA-directed RNA polymerase III 0.12 OF
KHC70428 No alias DNA-directed RNA polymerase III subunit RPC2;"RNA... 0.13 OF
MGG_06984T0 No alias DNA-directed RNA polymerase III subunit RPC2... 0.12 OF
POW07023 No alias RNA polymerase Rpb2, domain 5;RNA polymerase, beta... 0.03 OF
SPAC4G9.08c.1 No alias DNA-directed RNA polymerase III complex subunit Rpc2... 0.1 OF
YOR207C No alias Second-largest subunit of RNA polymerase III; RNA... 0.21 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007641 RNA_pol_Rpb2_7 1105 1189
IPR007646 RNA_pol_Rpb2_4 605 664
IPR007120 DNA-dir_RNAP_su2_dom 732 1103
IPR007642 RNA_pol_Rpb2_2 245 424
IPR007647 RNA_pol_Rpb2_5 685 725
IPR007645 RNA_pol_Rpb2_3 503 566
IPR007644 RNA_pol_bsu_protrusion 91 476
No external refs found!