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  5. YGL092W

YGL092W


Description : Essential protein with distinct roles in two nuclear pore subcomplexes; catalyzes its own proteolytic cleavage in vivo to generate a C-terminal fragment that is a structural component of the Nup84p subcomplex (with roles in NPC biogenesis and localization of genes to the nuclear periphery), and an N-terminal fragment that is one of several FG-nucleoporins within the NPC central core directly responsible for nucleocytoplasmic transport; homologous to human NUP98 [Source:SGD;Acc:S000003060]


Gene families : OG_03_0000675 (OF) Phylogenetic Tree(s): OG0000675_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YGL092W
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AFR93115 No alias nuclear pore complex protein Nup98-Nup96;Nucleoporin FG... 0.14 OF
AOA66079 No alias Nucleoporin FG repeat 0.02 OF
AOA67446 No alias Peptidase S59, nucleoporin 0.13 OF
CAG81152 No alias Peptidase S59, nucleoporin 0.07 OF
CAK38825 No alias Nuclear protein 96 0.12 OF
CBF81523 No alias Putative uncharacterized proteinSONB 0.14 OF
EAA31174 No alias Peptidase S59, nucleoporin 0.06 OF
EAL89683 No alias nucleoporin SONB, putative 0.08 OF
EDN90941 No alias Nucleoporin FG repeat 0.11 OF
EFI27761 No alias nucleoporin autopeptidase 0.06 OF
EGR44470 No alias Nuclear protein 96 0.09 OF
EJF57390 No alias Nuclear protein 96 0.02 OF
EJF62232 No alias Nucleoporin autopeptidase 0.02 OF
ESU14851 No alias Nucleoporin FG repeat 0.17 OF
KHC76605 No alias hypothetical protein;Nuclear protein 96;Nucleoporin FG... 0.18 OF
KHC79185 No alias nuclear pore complex protein Nup98-Nup96;Nucleoporin FG... 0.02 OF
MGG_04617T0 No alias Putative uncharacterized protein... 0.03 OF
SPAC1486.05.1 No alias nucleoporin Nup98 and Nup96 [Source:PomBase;Acc:SPAC1486.05] 0.19 OF

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
BP GO:0006913 nucleocytoplasmic transport IEA Interproscan
MF GO:0017056 structural constituent of nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021967 Nup96 898 1149
IPR025574 Nucleoporin_FG_rpt 70 157
IPR007230 Peptidase_S59 460 610
No external refs found!