YER164W

Description : Chromatin remodeler that regulates various aspects of transcription; acts in in conjunction with Isw1b to regulate chromatin structure and maintain chromatin integrity during transcription elongation by RNAP II by preventing trans-histone exchange over coding regions; contains a chromo domain, a helicase domain and a DNA-binding domain; component of both the SAGA and SLIK complexes [Source:SGD;Acc:S000000966]

Gene families : OG_03_0002493 (OF) Phylogenetic Tree(s): OG0002493_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: YER164W
Cluster	HCCA: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
AFR97170	No alias	chromodomain-helicase-DNA-binding protein 1;Domain of...	0.02	OF
AOA67655	No alias	SNF2-related, N-terminal domain	0.1	OF
CAG81577	No alias	SNF2-related, N-terminal domain	0.07	OF
CAK45266	No alias	Chromo (CHRromatin Organisation MOdifier) domain	0.08	OF
CBF87846	No alias	chromodomain helicase	0.09	OF
EAL90357	No alias	chromodomain helicase (Chd1), putative	0.04	OF
EAU91710	No alias	transcription regulator	0.02	OF
EGR50485	No alias	SNF2-related, N-terminal domain	0.09	OF
ESA44011	No alias	Helicase, C-terminal	0.08	OF
ESA44012	No alias	Helicase, C-terminal	0.08	OF
ESU13297	No alias	SNF2-related, N-terminal domain	0.06	OF
KHC83117	No alias	chromodomain-helicase-DNA-binding protein 1;Domain of...	0.13	OF
MGG_04589T0	No alias	Chromodomain helicase DNA binding protein...	0.08	OF
POW01219	No alias	Domain of unknown function DUF4208;Carbamoyl-phosphate...	0.03	OF
SPAC1783.05.1	No alias	ATP-dependent DNA helicase Hrp1 [Source:PomBase;Acc:SPAC1783.05]	0.05	OF
SPAC3G6.01.1	No alias	ATP-dependent DNA helicase Hrp3 [Source:PomBase;Acc:SPAC3G6.01]	0.13	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR025260	DUF4208	1368	1461
IPR041150	Cdh1_DBD	1010	1129
IPR000330	SNF2_N	388	664
IPR001650	Helicase_C	698	809
IPR023780	Chromo_domain	286	341
IPR023780	Chromo_domain	182	236

External Links

No external refs found!

YER164W

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation