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  5. YER162C

YER162C


Description : Protein that recognizes and binds damaged DNA (with Rad23p) during NER; subunit of Nuclear Excision Repair Factor 2 (NEF2); also involved, with Rad23p, in turnover of ubiquitylated proteins; Rad4p-Rad23p heterodimer binds to promoters of DNA damage response genes to repress their transcription in the absence of DNA damage; NER stands for nucleotide excision repair [Source:SGD;Acc:S000000964]


Gene families : OG_03_0000554 (OF) Phylogenetic Tree(s): OG0000554_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YER162C
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AOA65967 No alias Rad4/PNGase transglutaminase-like fold 0.03 OF
CBF70012 No alias hypothetical DNA excision repair complex component 0.02 OF
EAL93460 No alias Rad4 family protein 0.03 OF
ESU11204 No alias Rad4 beta-hairpin domain 1 0.03 OF
ESU14980 No alias Rad4 beta-hairpin domain 2 0.01 OF
KHC79300 No alias xeroderma pigmentosum group C-complementing protein;Rad4... 0.02 OF
POV95700 No alias Rad4 beta-hairpin domain 2;Rad4 beta-hairpin domain... 0.02 OF
POW02124 No alias Rad4 beta-hairpin domain 2;Rad4 beta-hairpin domain... 0.01 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018328 Rad4_beta-hairpin_dom3 551 624
IPR018325 Rad4/PNGase_transGLS-fold 285 425
IPR018326 Rad4_beta-hairpin_dom1 431 487
No external refs found!