EDO04900


Description : DNA binding HTH domain, Psq-type


Gene families : OG_03_0000046 (OF) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDO04900
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
EDN95836 No alias DDE superfamily endonuclease domain 0.03 OF
EDN97523 No alias DNA binding HTH domain, Psq-type 0.07 OF
EDN97538 No alias DDE superfamily endonuclease domain 0.03 OF
EDN98259 No alias DNA binding HTH domain, Psq-type 0.04 OF
EDN99830 No alias DNA binding HTH domain, Psq-type 0.03 OF
EDO00352 No alias HTH CenpB-type DNA-binding domain 0.06 OF
EDO01013 No alias DNA binding HTH domain, Psq-type 0.04 OF
EDO03793 No alias DDE superfamily endonuclease domain 0.03 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006600 HTH_CenpB_DNA-bd_dom 61 119
IPR004875 DDE_SF_endonuclease_dom 195 364
IPR007889 HTH_Psq 7 46
No external refs found!