EDO00868


Description : BRCT domain


Gene families : OG_03_0002010 (OF) Phylogenetic Tree(s): OG0002010_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDO00868
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
CBF90206 No alias DNA ligase 4 0.04 OF
EAA33632 No alias BRCT domain 0.02 OF
ESU08977 No alias DNA ligase, ATP-dependent, C-terminal 0.05 OF
SPCC1183.05c.1 No alias DNA repair ligase Lig4 [Source:PomBase;Acc:SPCC1183.05c] 0.02 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003910 DNA ligase (ATP) activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
BP GO:0006310 DNA recombination IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012308 DNA_ligase_ATP-dep_N 129 208
IPR012310 DNA_ligase_ATP-dep_cent 250 412
IPR012309 DNA_ligase_ATP-dep_C 427 519
IPR001357 BRCT_dom 579 660
No external refs found!