EDN96231

Description : Integrase zinc-binding domain

Gene families : OG_03_0000032 (OF) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EDN96231
Cluster	HCCA: Cluster_72

Target	Alias	Description	ECC score	Gene Family Method
EDN91529	No alias	Chromo domain	0.05	OF
EDN93664	No alias	Reverse transcriptase domain	0.02	OF
EDO01783	No alias	Zinc finger, CCHC-type	0.07	OF
EDO01784	No alias	Reverse transcriptase/retrotransposon-derived protein,...	0.12	OF
EDO03204	No alias	Reverse transcriptase domain	0.03	OF
MGG_17557T0	No alias	Putative uncharacterized protein...	0.04	OF
POW01463	No alias	Reverse transcriptase, RNase H-like domain;Reverse...	0.02	OF
POW03051	No alias	Reverse transcriptase domain	0.05	OF
POW10091	No alias	hypothetical protein	0.02	OF
POW12429	No alias	Reverse transcriptase domain;Reverse transcriptase,...	0.03	OF

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001584	Integrase_cat-core	1390	1504
IPR041373	RT_RNaseH	1088	1193
IPR000477	RT_dom	841	1000
IPR041588	Integrase_H2C2	1319	1374

External Links

No external refs found!