EDN91529

Description : Chromo domain

Gene families : OG_03_0000032 (OF) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EDN91529
Cluster	HCCA: Cluster_98

Target	Alias	Description	ECC score	Gene Family Method
EDN94553	No alias	Reverse transcriptase, RNase H-like domain	0.04	OF
EDN94554	No alias	No description available	0.04	OF
EDN96231	No alias	Integrase zinc-binding domain	0.05	OF
EDO00731	No alias	Integrase zinc-binding domain	0.03	OF
EDO00905	No alias	No description available	0.03	OF
EDO01249	No alias	Chromo domain	0.03	OF
EDO01263	No alias	Integrase, catalytic core	0.03	OF
EDO01784	No alias	Reverse transcriptase/retrotransposon-derived protein,...	0.05	OF
KHC79233	No alias	hypothetical protein;Integrase core domain;RNase H-like...	0.03	OF
MGG_17557T0	No alias	Putative uncharacterized protein...	0.03	OF

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR041588	Integrase_H2C2	247	304
IPR041373	RT_RNaseH	44	149
IPR001584	Integrase_cat-core	339	439
IPR023780	Chromo_domain	623	671

External Links

No external refs found!