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EGR48947


Description : Zinc finger, Sec23/Sec24-type


Gene families : OG_03_0002619 (OF) Phylogenetic Tree(s): OG0002619_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EGR48947
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AFR98318 No alias protein transporter SEC24;Sec23/Sec24 zinc... 0.03 OF
AOA69761 No alias Sec23/Sec24, helical domain 0.03 OF
CAG79519 No alias Zinc finger, Sec23/Sec24-type 0.06 OF
CAK42831 No alias Sec23/Sec24 helical domain 0.12 OF
CBF83444 No alias vesicle coat complex COPII, subunit Sec24 family... 0.06 OF
EAA28841 No alias Zinc finger, Sec23/Sec24-type 0.05 OF
EAU89424 No alias protein transporter SEC24 0.02 OF
EDN95273 No alias Zinc finger, Sec23/Sec24-type 0.05 OF
ESU17979 No alias Sec23/Sec24, trunk domain 0.1 OF
POW08541 No alias Gelsolin-like domain;Zinc finger,... 0.02 OF
SPBC4.03c.1 No alias COPII-coated vesicle component Sfb3 (predicted)... 0.04 OF
YHR098C No alias Component of the Sec23p-Sfb3p heterodimer of the COPII... 0.04 OF

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006896 Sec23/24_trunk_dom 393 639
IPR006900 Sec23/24_helical_dom 752 853
IPR012990 Sec23_24_beta_S 646 729
IPR007123 Gelsolin-like_dom 882 947
IPR006895 Znf_Sec23_Sec24 315 353
No external refs found!