Description : PRO8NT domain

Gene families : OG_03_0001356 (OF) Phylogenetic Tree(s): OG0001356_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: EGR48671
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AFR92284 No alias pre-mRNA-processing-splicing factor 8;RNA recognition... 0.05 OF
AOA68888 No alias RNA recognition motif, spliceosomal PrP8 0.13 OF
CAG81996 No alias PROCN domain 0.17 OF
CAK39557 No alias RNA recognition motif of the spliceosomal PrP8 0.06 OF
CBF77331 No alias MRNA splicing protein PRP8 0.09 OF
EAA33717 No alias PROCT domain 0.08 OF
EAL87400 No alias pre-mRNA splicing factor (Prp8), putative 0.1 OF
EAU86045 No alias pre-mRNA-processing-splicing factor 0.07 OF
EDO00734 No alias PROCT domain 0.09 OF
EDO00735 No alias PROCN domain 0.1 OF
EJF57100 No alias PROCN (NUC071) domain 0.05 OF
ESU07986 No alias pre-mRNA-processing-splicing factor 8 0.07 OF
KHC70723 No alias pre-mRNA-processing factor 8;PROCN (NUC071)... 0.12 OF
MGG_05244T0 No alias Pre-mRNA-processing-splicing factor 8... 0.06 OF
POV99819 No alias PROCN domain 0.08 OF
POW11326 No alias PRO8NT domain;PROCN domain 0.05 OF
SPAC4F8.12c.1 No alias U5 snRNP complex subunit Spp42 [Source:PomBase;Acc:SPAC4F8.12c] 0.18 OF
YHR165C No alias Component of U4/U6-U5 snRNP complex; involved in second... 0.15 OF

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0017070 U6 snRNA binding IEA Interproscan
MF GO:0030623 U5 snRNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012984 PROCT 2250 2370
IPR012592 PROCN 432 838
IPR019581 Prp8_U5-snRNA-bd 1247 1380
IPR019582 RRM_spliceosomal_PrP8 1023 1113
IPR019580 Prp8_U6-snRNA-bd 1479 1637
IPR021983 PRP8_domainIV 1799 2026
IPR012591 PRO8NT 82 233
No external refs found!