Description : COPII cargo receptor subunit Sec23a (predicted) [Source:PomBase;Acc:SPCC31H12.07]

Gene families : OG_03_0001625 (OF) Phylogenetic Tree(s): OG0001625_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: SPCC31H12.07.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AFR97534 No alias protein transporter SEC23;Sec23/Sec24 helical... 0.05 OF
AOA69531 No alias Zinc finger, Sec23/Sec24-type 0.02 OF
CAG79640 No alias Gelsolin-like domain 0.05 OF
CAK37008 No alias Sec23/Sec24 beta-sandwich domain 0.04 OF
CBF89861 No alias Protein transport protein sec23 0.03 OF
EAA32168 No alias Sec23/Sec24 beta-sandwich 0.03 OF
EAL88052 No alias protein transport protein Sec23, putative 0.05 OF
EAU89573 No alias protein transporter SEC23 0.02 OF
EDN97626 No alias Sec23/Sec24, trunk domain 0.04 OF
EGR45004 No alias Sec23/Sec24 beta-sandwich 0.02 OF
EJF56800 No alias Gelsolin repeat 0.02 OF
ESU07283 No alias transporter SEC23 0.04 OF
KHC76645 No alias protein transporter SEC23;Sec23/Sec24 helical... 0.04 OF
YPR181C No alias GTPase-activating protein, stimulates the GTPase... 0.05 OF

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 628 713
IPR006900 Sec23/24_helical_dom 512 610
IPR006896 Sec23/24_trunk_dom 122 386
IPR012990 Sec23_24_beta_S 397 499
IPR006895 Znf_Sec23_Sec24 53 92
No external refs found!