SPCC1795.11.1

Description : translation initiation RNA helicase Sum3 [Source:PomBase;Acc:SPCC1795.11]

Gene families : OG_03_0000663 (OF) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SPCC1795.11.1
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
EAL90021	No alias	ATP dependent RNA helicase (Dbp1), putative	0.07	OF
POW06267	No alias	DEAD/DEAH box helicase domain;Helicase, C-terminal	0.04	OF
YOR204W	No alias	ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase;...	0.05	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	416	525
IPR011545	DEAD/DEAH_box_helicase_dom	193	379

External Links

No external refs found!