Description : ATP-dependent DNA helicase Snf22 [Source:PomBase;Acc:SPCC1620.14c]

Gene families : OG_03_0000765 (OF) Phylogenetic Tree(s): OG0000765_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: SPCC1620.14c.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AFR98059 No alias ATP-dependent helicase STH1/SNF2;Bromodomain;QLQ;SNF2... 0.06 OF
AOA70328 No alias Glutamine-Leucine-Glutamine, QLQ 0.12 OF
CAG81384 No alias Snf2, ATP coupling domain 0.05 OF
CAG81616 No alias Snf2, ATP coupling domain 0.04 OF
CAK43037 No alias Bromodomain 0.06 OF
CBF86520 No alias catalytic subunit of the SWI/SNF chromatin remodeling complex 0.13 OF
EAA27892 No alias Bromodomain 0.06 OF
EAL91962 No alias RSC complex subunit (Sth1), putative 0.08 OF
EAU93321 No alias SNF2-family ATP dependent chromatin remodeling factor snf21 0.03 OF
EDO04534 No alias SNF2-related, N-terminal domain 0.07 OF
EED84787 No alias Bromodomain 0.06 OF
EGR50940 No alias Snf2, ATP coupling domain 0.1 OF
EJF58780 No alias Bromodomain 0.05 OF
ESU13545 No alias SNF2-family ATP-dependent chromatin remodeling factor snf22 0.08 OF
KHC78804 No alias ATP-dependent helicase STH1/SNF2;Bromodomain;HSA;SNF2... 0.04 OF
KHC81282 No alias ATP-dependent helicase STH1/SNF2;Helicase conserved... 0.06 OF
MGG_06388T0 No alias SNF2 family ATP-dependent chromatin-remodeling factor... 0.04 OF
POV96926 No alias Helicase/SANT-associated domain;Snf2, ATP coupling... 0.01 OF
YIL126W No alias ATPase component of the RSC chromatin remodeling... 0.05 OF
YOR290C No alias Catalytic subunit of the SWI/SNF chromatin remodeling... 0.09 OF

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0042393 histone binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR014978 Gln-Leu-Gln_QLQ 431 464
IPR001650 Helicase_C 1188 1301
IPR029295 SnAC 1399 1458
IPR001487 Bromodomain 1541 1610
IPR000330 SNF2_N 881 1164
No external refs found!