SPBPJ4664.04.1

Description : coatomer alpha subunit Cop1 (predicted) [Source:PomBase;Acc:SPBPJ4664.04]

Gene families : OG_03_0002654 (OF) Phylogenetic Tree(s): OG0002654_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SPBPJ4664.04.1
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
AFR96778	No alias	coatomer protein complex, subunit alpha (xenin);Coatomer...	0.06	OF
AOA65926	No alias	Coatomer, WD associated region	0.12	OF
CAG79756	No alias	WD40 repeat	0.07	OF
CAL00470	No alias	Coatomer WD associated region	0.05	OF
CBF83542	No alias	Coatomer alpha subunit	0.07	OF
EAA28645	No alias	WD40 repeat	0.07	OF
EAL92694	No alias	Coatomer subunit alpha, putative	0.07	OF
EAU89454	No alias	coatomer subunit alpha-2	0.03	OF
EDN95254	No alias	Coatomer, alpha subunit, C-terminal	0.08	OF
EGR48167	No alias	WD40 repeat	0.07	OF
EJF57940	No alias	Coatomer (COPI) alpha subunit C-terminus	0.03	OF
ESU14274	No alias	coatomer subunit alpha	0.1	OF
KHC80117	No alias	coatomer protein complex, subunit alpha (xenin);Coatomer...	0.09	OF
MGG_03511T0	No alias	Coatomer alpha subunit [Source:UniProtKB/TrEMBL;Acc:G4N7Y7]	0.07	OF
POV98842	No alias	Coatomer, alpha subunit, C-terminal;Coatomer, WD...	0.02	OF
YDL145C	No alias	Alpha subunit of COPI vesicle coatomer complex; complex...	0.12	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030126	COPI vesicle coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010714	Coatomer_asu_C	823	1204
IPR006692	Coatomer_WD-assoc_reg	349	773
IPR001680	WD40_repeat	249	284
IPR001680	WD40_repeat	86	123
IPR001680	WD40_repeat	128	165
IPR001680	WD40_repeat	207	239
IPR001680	WD40_repeat	45	81

External Links

No external refs found!