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SPBC839.10.1


Description : U1 snRNP-associated protein Usp107 [Source:PomBase;Acc:SPBC839.10]


Gene families : OG_03_0003576 (OF) Phylogenetic Tree(s): OG0003576_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPBC839.10.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AFR93665 No alias hypothetical protein;RNA recognition motif. (a.k.a. RRM,... 0.05 OF
CAG80431 No alias No description available 0.03 OF
CAK46880 No alias PWI domain 0.03 OF
CBF70315 No alias conserved hypothetical protein 0.04 OF
EAA33363 No alias PWI domain 0.02 OF
EAL93275 No alias conserved hypothetical protein 0.03 OF
EAU86195 No alias PWI domainRNA recognition motif domain 0.03 OF
EGR44858 No alias PWI domain 0.04 OF
EJF56039 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 OF
KHC81254 No alias U1 small nuclear ribonucleoprotein component SNU71;PWI domain 0.02 OF
MGG_14969T0 No alias Putative uncharacterized protein... 0.03 OF
YGR013W No alias Component of U1 snRNP required for mRNA splicing via... 0.04 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
BP GO:0006397 mRNA processing IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002483 PWI_dom 624 685
IPR000504 RRM_dom 141 203
No external refs found!