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  5. SPBC776.04.1

SPBC776.04.1


Description : COPII cargo receptor subunit Sec23b (predicted) [Source:PomBase;Acc:SPBC776.04]


Gene families : OG_03_0001625 (OF) Phylogenetic Tree(s): OG0001625_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPBC776.04.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AOA65775 No alias Sec23/Sec24, helical domain 0.03 OF
AOA69531 No alias Zinc finger, Sec23/Sec24-type 0.02 OF
EDN97626 No alias Sec23/Sec24, trunk domain 0.02 OF
EGR45004 No alias Sec23/Sec24 beta-sandwich 0.03 OF
EJF56800 No alias Gelsolin repeat 0.01 OF
KHC76645 No alias protein transporter SEC23;Sec23/Sec24 helical... 0.02 OF
POV95408 No alias Zinc finger, Sec23/Sec24-type;Gelsolin-like... 0.03 OF

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006900 Sec23/24_helical_dom 517 615
IPR007123 Gelsolin-like_dom 631 718
IPR006895 Znf_Sec23_Sec24 53 92
IPR012990 Sec23_24_beta_S 401 504
IPR006896 Sec23/24_trunk_dom 121 390
No external refs found!