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  5. SPBC6B1.07.1

SPBC6B1.07.1


Description : U4/U6 x U5 tri-snRNP complex subunit Prp1 [Source:PomBase;Acc:SPBC6B1.07]


Gene families : OG_03_0001682 (OF) Phylogenetic Tree(s): OG0001682_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPBC6B1.07.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AOA69845 No alias PRP1 splicing factor, N-terminal 0.02 OF
CAK48894 No alias Tetratricopeptide repeat 0.04 OF
CBF79397 No alias mRNA splicing factor 0.06 OF
EAL87698 No alias mRNA splicing factor (Prp1/Zer1), putative 0.05 OF
EAU86347 No alias pre-mRNA splicing factor prp1 0.03 OF
EDO02532 No alias Tetratricopeptide repeat 0.05 OF
EED48797 No alias mRNA splicing factor (Prp1/Zer1), putative 0.03 OF
EGR45600 No alias Tetratricopeptide repeat 0.04 OF
ESU16930 No alias PRP1 splicing factor, N-terminal 0.08 OF
KHC84003 No alias pre-mRNA-processing factor 6;"PRP1 splicing factor, N-terminal" 0.06 OF
MGG_07213T0 No alias Pre-mRNA-splicing factor prp1... 0.07 OF
POV96798 No alias PRP1 splicing factor, N-terminal 0.05 OF
YBR055C No alias Splicing factor; component of the U4/U6-U5 snRNP complex... 0.04 OF

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019734 TPR_repeat 810 843
IPR010491 PRP1_N 13 157
No external refs found!