SPBC20F10.01.1


Description : snoRNP pseudouridylase box H/ACA snoRNP complex protein Gar1 [Source:PomBase;Acc:SPBC20F10.01]


Gene families : OG_03_0003024 (OF) Phylogenetic Tree(s): OG0003024_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPBC20F10.01.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AFR96989 No alias H/ACA ribonucleoprotein complex subunit 1;Gar1/Naf1 RNA... 0.06 OF
AOA68031 No alias H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 0.07 OF
CAG82530 No alias H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 0.05 OF
CAK43999 No alias Gar1/Naf1 RNA binding region 0.25 OF
CBF81453 No alias snoRNP protein 0.07 OF
EAL89424 No alias snoRNP protein (gar1), putative 0.07 OF
EDN95099 No alias H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 0.06 OF
EGR48875 No alias H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 0.07 OF
ESA42808 No alias H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 0.04 OF
ESU12458 No alias H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 0.03 OF
KHC83896 No alias H/ACA ribonucleoprotein complex subunit 1;Gar1/Naf1 RNA... 0.18 OF
MGG_03556T0 No alias H/ACA ribonucleoprotein complex subunit 1... 0.02 OF
YHR089C No alias Protein component of the H/ACA snoRNP pseudouridylase... 0.08 OF

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
BP GO:0042254 ribosome biogenesis IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007504 H/ACA_rnp_Gar1/Naf1 18 119
No external refs found!