SPBC16C6.13c.1

Description : coatomer beta' subunit (predicted) [Source:PomBase;Acc:SPBC16C6.13c]

Gene families : OG_03_0002402 (OF) Phylogenetic Tree(s): OG0002402_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SPBC16C6.13c.1
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
AFR93574	No alias	coatomer beta' subunit;Coatomer WD associated region;WD...	0.03	OF
AOA66488	No alias	Coatomer, WD associated region	0.07	OF
CAG82427	No alias	WD40 repeat	0.04	OF
CAK44202	No alias	WD domain, G-beta repeat	0.04	OF
CBF70445	No alias	Coatomer subunit beta', putative	0.02	OF
EAA33241	No alias	Coatomer, WD associated region	0.04	OF
EAL93356	No alias	COPI vesicle coat beta' subunit, putative	0.04	OF
EAU82527	No alias	coatomer beta' subunit	0.03	OF
EGR44799	No alias	Coatomer, WD associated region	0.03	OF
EJF62219	No alias	Coatomer WD associated region	0.02	OF
ESU11869	No alias	coatomer subunit beta	0.03	OF
KHC73366	No alias	hypothetical protein;Coatomer WD associated region;"WD...	0.05	OF
MGG_10504T0	No alias	Coatomer beta' subunit [Source:UniProtKB/TrEMBL;Acc:G4MS34]	0.05	OF
POV98116	No alias	Coatomer, WD associated region;WD40 repeat	0.03	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006692	Coatomer_WD-assoc_reg	319	763
IPR001680	WD40_repeat	7	42
IPR001680	WD40_repeat	131	170
IPR001680	WD40_repeat	219	255
IPR001680	WD40_repeat	89	126
IPR001680	WD40_repeat	179	214
IPR001680	WD40_repeat	50	84

External Links

No external refs found!