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  5. SPAC23G3.01.1

SPAC23G3.01.1


Description : RNA polymerase II complex subunit Rpb2 [Source:PomBase;Acc:SPAC23G3.01]


Gene families : OG_03_0002495 (OF) Phylogenetic Tree(s): OG0002495_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPAC23G3.01.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AOA67784 No alias RNA polymerase Rpb2, domain 7 0.03 OF
CAG80564 No alias RNA polymerase Rpb2, domain 2 0.06 OF
CAK41002 No alias RNA polymerase Rpb2, domain 6 0.1 OF
CBF82508 No alias DNA-directed RNA polymerase Fragment 0.03 OF
EAA27870 No alias DNA-directed RNA polymerase, subunit 2, hybrid-binding domain 0.07 OF
EAL84702 No alias DNA-dependent RNA polymerase II RPB140 0.1 OF
EAU92775 No alias DNA-dependent RNA polymerase II second largest subunit 0.02 OF
EDN91482 No alias DNA-directed RNA polymerase, subunit 2, hybrid-binding domain 0.04 OF
ESU08125 No alias DNA-directed RNA polymerase 0.07 OF
KHC82945 No alias DNA-directed RNA polymerase II subunit RPB2;RNA... 0.09 OF
MGG_04714T0 No alias DNA-directed RNA polymerase II subunit RPB2... 0.08 OF
POW05214 No alias RNA polymerase, beta subunit, protrusion;DNA-directed... 0.03 OF
YOR151C No alias RNA polymerase II second largest subunit B150; part of... 0.1 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007644 RNA_pol_bsu_protrusion 30 441
IPR007641 RNA_pol_Rpb2_7 1115 1206
IPR007647 RNA_pol_Rpb2_5 665 734
IPR007646 RNA_pol_Rpb2_4 566 627
IPR007120 DNA-dir_RNAP_su2_dom 741 1113
IPR007642 RNA_pol_Rpb2_2 205 393
IPR007645 RNA_pol_Rpb2_3 467 531
No external refs found!