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  5. SPAC1D4.12.1

SPAC1D4.12.1


Description : transcription factor TFIIH complex subunit Rad15 [Source:PomBase;Acc:SPAC1D4.12]


Gene families : OG_03_0002857 (OF) Phylogenetic Tree(s): OG0002857_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPAC1D4.12.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AOA68084 No alias Helical and beta-bridge domain 0.03 OF
CAK39953 No alias DEAD_2 0.03 OF
EAA27300 No alias ATP-dependent helicase, C-terminal 0.01 OF
EAL90723 No alias TFIIH complex helicase Rad3, putative 0.02 OF
EDN93739 No alias ATP-dependent helicase, C-terminal 0.03 OF
MGG_03132T0 No alias DNA repair helicase rad15 [Source:UniProtKB/TrEMBL;Acc:G4NAV5] 0.02 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003678 DNA helicase activity IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006139 nucleobase-containing compound metabolic process IEA Interproscan
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006555 ATP-dep_Helicase_C 523 698
IPR010643 HBB 269 411
IPR010614 DEAD_2 71 255
No external refs found!