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  5. SPAC1687.11.1

SPAC1687.11.1


Description : rRNA methyltransferase Spb1 (predicted) [Source:PomBase;Acc:SPAC1687.11]


Gene families : OG_03_0000402 (OF) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPAC1687.11.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AFR93268 No alias AdoMet-dependent rRNA methyltransferase SPB1;Spb1... 0.03 OF
AOA68383 No alias Ribosomal RNA methyltransferase FtsJ domain 0.03 OF
CAG78290 No alias Ribosomal RNA methyltransferase FtsJ domain 0.04 OF
CAG80799 No alias Ribosomal RNA methyltransferase, Spb1, C-terminal 0.03 OF
CAK47295 No alias Domain of unknown function (DUF3381) 0.04 OF
CBF90216 No alias AdoMet-dependent rRNA methyltransferase spb1 0.04 OF
EAA32209 No alias Ribosomal RNA methyltransferase FtsJ domain 0.03 OF
EAL91403 No alias rRNA methyltransferase Spb1, putative 0.03 OF
EAU93073 No alias RNA methyltransferase 0.02 OF
EDN99609 No alias Ribosomal RNA methyltransferase FtsJ domain 0.02 OF
EDO00644 No alias Ribosomal RNA methyltransferase, Spb1, C-terminal 0.04 OF
EDO00645 No alias Ribosomal RNA methyltransferase FtsJ domain 0.02 OF
EGR45000 No alias Ribosomal RNA methyltransferase, Spb1, C-terminal 0.04 OF
EGR46840 No alias Ribosomal RNA methyltransferase FtsJ domain 0.04 OF
ESU13717 No alias AdoMet-dependent rRNA methyltransferase spb-1 0.03 OF
ESU15855 No alias tRNA (uridine-2'-O-)-methyltransferase TRM7 0.02 OF
MGG_08140T0 No alias AdoMet-dependent rRNA methyltransferase SPB1... 0.03 OF
YCL054W No alias AdoMet-dependent methyltransferase; involved in rRNA... 0.04 OF

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
BP GO:0032259 methylation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012920 rRNA_MeTfrase_Spb1_C 587 798
IPR024576 rRNA_MeTfrase_Spb1_DUF3381 235 386
IPR002877 rRNA_MeTrfase_FtsJ_dom 25 201
No external refs found!