SPAC10F6.02c.1

Description : ATP-dependent RNA helicase Prp22 [Source:PomBase;Acc:SPAC10F6.02c]

Gene families : OG_03_0000045 (OF) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SPAC10F6.02c.1
Cluster	HCCA: Cluster_44

Target	Alias	Description	ECC score	Gene Family Method
AFR93170	No alias	ATP-dependent RNA helicase DDX35;AAA domain;Helicase...	0.02	OF
AFR95524	No alias	pre-mRNA-splicing factor ATP-dependent RNA helicase...	0.05	OF
AFR97936	No alias	pre-mRNA-splicing factor ATP-dependent RNA helicase...	0.04	OF
AOA65445	No alias	Helicase-associated domain	0.03	OF
AOA66148	No alias	DEAD/DEAH box helicase domain	0.05	OF
AOA66220	No alias	Helicase, C-terminal	0.04	OF
CAG80826	No alias	Domain of unknown function DUF1605	0.06	OF
CAG82909	No alias	Helicase, C-terminal	0.05	OF
CAG83003	No alias	Helicase, C-terminal	0.04	OF
CAG83032	No alias	DEAD/DEAH box helicase domain	0.03	OF
CAK41148	No alias	Helicase conserved C-terminal domain	0.02	OF
CAK44849	No alias	Helicase associated domain (HA2)	0.04	OF
CAK48696	No alias	Helicase associated domain (HA2)	0.02	OF
CAK97428	No alias	Helicase associated domain (HA2)	0.02	OF
CBF70766	No alias	mRNA splicing factor RNA helicase	0.07	OF
CBF74845	No alias	mRNA splicing factor RNA helicase	0.06	OF
CBF76926	No alias	hypothetical protein similar to ATP dependent helicase	0.03	OF
EAA27287	No alias	DEAD/DEAH box helicase domain	0.02	OF
EAA31559	No alias	Helicase-associated domain	0.03	OF
EAA35877	No alias	Helicase, C-terminal	0.03	OF
EAL91525	No alias	RNA helicase-like splicing factor (HRH1), putative	0.05	OF
EAL93068	No alias	mRNA splicing factor RNA helicase (Cdc28), putative	0.07	OF
EAU85197	No alias	ATP-dependent RNA helicase Prp43	0.04	OF
EAU85955	No alias	pre-mRNA splicing factor	0.07	OF
EAU92580	No alias	ATP-dependent RNA helicase DHX8	0.07	OF
EAU93276	No alias	pre-mRNA splicing factor	0.07	OF
EDN95366	No alias	Helicase, C-terminal	0.09	OF
EDN99006	No alias	Helicase-associated domain	0.1	OF
EDO00044	No alias	DEAD/DEAH box helicase domain	0.06	OF
EED79978	No alias	No description available	0.03	OF
EED80851	No alias	S1 domain	0.04	OF
EED81955	No alias	Domain of unknown function DUF1605	0.03	OF
EGR45053	No alias	Helicase-associated domain	0.03	OF
EGR45439	No alias	Domain of unknown function DUF1605	0.02	OF
EGR48593	No alias	Helicase-associated domain	0.02	OF
EGR50545	No alias	Helicase, C-terminal	0.02	OF
EGR50716	No alias	Helicase, C-terminal	0.07	OF
EJF55621	No alias	Helicase conserved C-terminal domain	0.06	OF
EJF57706	No alias	DEAD/DEAH box helicase	0.02	OF
ESU05632	No alias	pre-mRNA-splicing factor ATP-dependent RNA helicase prp16	0.04	OF
ESU10905	No alias	ATP-dependent RNA helicase DHX8	0.05	OF
ESU17099	No alias	Helicase, C-terminal	0.08	OF
ESU18026	No alias	pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43	0.02	OF
KHC71219	No alias	pre-mRNA-splicing factor ATP-dependent RNA helicase...	0.05	OF
KHC75427	No alias	ATP-dependent RNA helicase DHX8/PRP22;Helicase...	0.03	OF
MGG_03893T0	No alias	Pre-mRNA-splicing factor ATP-dependent RNA helicase...	0.03	OF
MGG_07501T0	No alias	ATP-dependent RNA helicase DHX8...	0.07	OF
MGG_08807T0	No alias	Pre-mRNA-splicing factor ATP-dependent RNA helicase...	0.06	OF
MGG_11351T0	No alias	Pre-mRNA-splicing factor ATP-dependent RNA helicase...	0.03	OF
POW10235	No alias	Domain of unknown function DUF1605;Helicase,...	0.05	OF
POW12867	No alias	Helicase-associated domain;Helicase, C-terminal;Domain...	0.02	OF
POW17111	No alias	Domain of unknown function DUF1605;Helicase,...	0.05	OF
YER013W	No alias	DEAH-box RNA-dependent ATPase/ATP-dependent RNA...	0.09	OF
YGL120C	No alias	RNA helicase in the DEAH-box family; functions in both...	0.02	OF
YKR086W	No alias	DEAH-box RNA helicase involved in second catalytic step...	0.07	OF
YNR011C	No alias	RNA-dependent DExD/H-box ATPase; required for activation...	0.06	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	517	667
IPR001650	Helicase_C	713	841
IPR003029	S1_domain	209	280
IPR007502	Helicase-assoc_dom	903	991
IPR011709	DUF1605	1050	1125

External Links

No external refs found!

SPAC10F6.02c.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation