CAG82530

Description : H/ACA ribonucleoprotein complex, subunit Gar1/Naf1

Gene families : OG_03_0003024 (OF) Phylogenetic Tree(s): OG0003024_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CAG82530
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
AFR96989	No alias	H/ACA ribonucleoprotein complex subunit 1;Gar1/Naf1 RNA...	0.05	OF
AOA68031	No alias	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	0.06	OF
CAK43999	No alias	Gar1/Naf1 RNA binding region	0.03	OF
CBF81453	No alias	snoRNP protein	0.04	OF
EAL89424	No alias	snoRNP protein (gar1), putative	0.03	OF
EAU88280	No alias	small nucleolar RNP protein	0.02	OF
EDN95099	No alias	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	0.05	OF
EGR48875	No alias	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	0.06	OF
ESA42808	No alias	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	0.09	OF
ESU12458	No alias	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	0.03	OF
KHC83896	No alias	H/ACA ribonucleoprotein complex subunit 1;Gar1/Naf1 RNA...	0.07	OF
POW07597	No alias	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	0.02	OF
SPBC20F10.01.1	No alias	snoRNP pseudouridylase box H/ACA snoRNP complex protein...	0.05	OF
YHR089C	No alias	Protein component of the H/ACA snoRNP pseudouridylase...	0.09	OF

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042254	ribosome biogenesis	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007504	H/ACA_rnp_Gar1/Naf1	16	125

External Links

No external refs found!