CAG78563

Description : DNA topoisomerase, type IA, central

Gene families : OG_03_0002722 (OF) Phylogenetic Tree(s): OG0002722_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CAG78563
Cluster	HCCA: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
AOA65742	No alias	DNA topoisomerase, type IA, central	0.08	OF
EAA27155	No alias	TOPRIM domain	0.03	OF
EAL87363	No alias	DNA topoisomerase III, putative	0.02	OF
EAU90946	No alias	Zinc finger, GRF-typeDNA topoisomerase, type IA,...	0.05	OF
ESU12846	No alias	TOPRIM domain	0.03	OF
KHC79017	No alias	DNA topoisomerase III;Toprim domain	0.1	OF
SPBC16G5.12c.1	No alias	DNA topoisomerase III [Source:PomBase;Acc:SPBC16G5.12c]	0.02	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003916	DNA topoisomerase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006265	DNA topological change	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006171	TOPRIM_domain	3	147
IPR013497	Topo_IA_cen	163	590

External Links

No external refs found!

CAG78563

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation