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  5. CAG78342

CAG78342


Description : RNA-binding S4 domain


Gene families : OG_03_0002397 (OF) Phylogenetic Tree(s): OG0002397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CAG78342
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AFR97648 No alias U3 small nucleolar ribonucleoprotein IMP3;Ribosomal... 0.05 OF
AOA67889 No alias RNA-binding S4 domain 0.11 OF
CAK39133 No alias S4 domain 0.16 OF
CBF70043 No alias U3 small nucleolar ribonucleoprotein subunit 0.08 OF
EAA32384 No alias Ribosomal protein S4/S9, N-terminal 0.03 OF
EAL93128 No alias U3 small nucleolar ribonucleoprotein subunit (Imp3), putative 0.11 OF
EAU80584 No alias U3 small nucleolar ribonucleoprotein IMP3 0.02 OF
EDO02535 No alias Ribosomal protein S4/S9, N-terminal 0.05 OF
EDO02536 No alias RNA-binding S4 domain 0.06 OF
ESU16904 No alias U3 small nucleolar ribonucleoprotein IMP3 0.09 OF
KHC71029 No alias U3 small nucleolar ribonucleoprotein IMP3;S4... 0.13 OF
SPAC19D5.05c.1 No alias U3 snoRNP-associated protein Imp3 (predicted)... 0.11 OF
YHR148W No alias Component of the SSU processome; SSU processome is... 0.06 OF

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001912 Ribosomal_S4/S9_N 5 64
IPR002942 S4_RNA-bd 109 155
No external refs found!