CAG78195


Description : RNA polymerase Rpb1, domain 1


Gene families : OG_03_0002856 (OF) Phylogenetic Tree(s): OG0002856_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CAG78195
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AFR94954 No alias DNA-directed RNA polymerase I subunit RPA1;RNA... 0.18 OF
AOA67914 No alias RNA polymerase Rpb1, domain 5 0.18 OF
CAK39952 No alias RNA polymerase Rpb1, domain 2 0.22 OF
EAA26770 No alias RNA polymerase Rpb1, domain 4 0.19 OF
EAL90722 No alias DNA-directed RNA polymerase I subunit (Rpa190), putative 0.19 OF
EDN93737 No alias RNA polymerase, alpha subunit 0.17 OF
EFI27675 No alias RNA polymerase I largest subunit 0.04 OF
EJF56609 No alias RNA polymerase Rpb1, domain 3 0.08 OF
ESU08827 No alias RNA polymerase Rpb1, domain 1 0.22 OF
KHC83811 No alias DNA-directed RNA polymerase I subunit RPA1;"RNA... 0.17 OF
MGG_01158T0 No alias DNA-directed RNA polymerase I subunit RPA1... 0.07 OF
POW13373 No alias RNA polymerase Rpb1, domain 5;RNA polymerase Rpb1,... 0.11 OF
SPBC4C3.05c.1 No alias DNA-directed RNA polymerase I complex large subunit Nuc1... 0.13 OF
YOR341W No alias RNA polymerase I largest subunit A190 [Source:SGD;Acc:S000005868] 0.15 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007081 RNA_pol_Rpb1_5 954 1571
IPR007066 RNA_pol_Rpb1_3 620 798
IPR007083 RNA_pol_Rpb1_4 859 947
IPR000722 RNA_pol_asu 438 616
IPR007080 RNA_pol_Rpb1_1 12 436
No external refs found!