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  5. MGG_04878T0

MGG_04878T0


Description : Lid2 complex component lid2 [Source:UniProtKB/TrEMBL;Acc:G4N2P7]


Gene families : OG_03_0000821 (OF) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MGG_04878T0
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AOA67945 No alias JmjC domain 0.03 OF
AOA68069 No alias JmjN domain 0.02 OF
CAG82221 No alias ARID DNA-binding domain 0.04 OF
CAG83135 No alias JmjC domain 0.04 OF
EAL85962 No alias PHD transcription factor (Rum1), putative 0.05 OF
EDN96551 No alias ARID DNA-binding domain 0.03 OF
EED77799 No alias JmjC domain 0.02 OF
EJF62291 No alias ARID/BRIGHT DNA binding domain 0.02 OF
ESU11880 No alias Lysine-specific demethylase-like domain 0.07 OF
KHC77977 No alias hypothetical protein;jmjN domain;PHD-finger;"JmjC... 0.03 OF
KHC83343 No alias hypothetical protein;PLU-1-like protein;PHD-finger;"JmjC... 0.03 OF
SPAC343.11c.1 No alias Swr1 complex subunit Chk1 [Source:PomBase;Acc:SPAC343.11c] 0.08 OF
SPBP19A11.06.1 No alias Lid2 complex subunit, predicted histone demethylase Lid2... 0.07 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 463 508
IPR019787 Znf_PHD-finger 1333 1378
IPR001606 ARID_dom 165 248
IPR003347 JmjC_dom 635 751
IPR013637 Lys_sp_deMease-like_dom 932 1281
IPR004198 Znf_C5HC2 860 914
IPR003349 JmjN 96 129
No external refs found!