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  5. MGG_03854T0

MGG_03854T0


Description : DNA ligase 1 [Source:UniProtKB/TrEMBL;Acc:G4NHG0]


Gene families : OG_03_0004633 (OF) Phylogenetic Tree(s): OG0004633_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MGG_03854T0
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
CAK44233 No alias ATP dependent DNA ligase domain 0.02 OF
CBF76559 No alias DNA ligase 0.06 OF
EAA29709 No alias DNA ligase, ATP-dependent, central 0.03 OF
EAU91496 No alias DNA ligase 0.02 OF
EGR48909 No alias DNA ligase, ATP-dependent, N-terminal 0.05 OF
ESU12394 No alias DNA ligase, ATP-dependent, central 0.03 OF
SPBC713.06.1 No alias DNA ligase (predicted) [Source:PomBase;Acc:SPBC713.06] 0.02 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003910 DNA ligase (ATP) activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
BP GO:0006310 DNA recombination IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012310 DNA_ligase_ATP-dep_cent 426 614
IPR012308 DNA_ligase_ATP-dep_N 169 345
IPR012309 DNA_ligase_ATP-dep_C 707 824
No external refs found!