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  5. YDR378C

YDR378C


Description : Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA [Source:SGD;Acc:S000002786]


Gene families : OG_03_0000514 (OF) Phylogenetic Tree(s): OG0000514_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YDR378C
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AFR94945 No alias small nuclear ribonucleoprotein F;LSM domain 0.02 OF
AFR98664 No alias U6 snRNA-associated Sm-like protein LSm6;LSM domain 0.02 OF
CAK42521 No alias LSM domain 0.03 OF
CBF79732 No alias small nuclear ribonucleoprotein SmF, putative 0.03 OF
CBF81168 No alias U6 snRNA-associated Sm-like protein LSm6, putative 0.07 OF
EAA27289 No alias LSM domain, eukaryotic/archaea-type 0.03 OF
EAL93847 No alias small nuclear ribonucleoprotein SmF, putative 0.04 OF
EAU84577 No alias small nuclear riboprotein F 0.04 OF
EDO64904 No alias LSM domain, eukaryotic/archaea-type 0.04 OF
EGR50712 No alias LSM domain, eukaryotic/archaea-type 0.04 OF
EGR52926 No alias LSM domain, eukaryotic/archaea-type 0.02 OF
ESU05642 No alias LSM domain, eukaryotic/archaea-type 0.02 OF
ESU06692 No alias LSM domain, eukaryotic/archaea-type 0.04 OF
KHC71007 No alias U6 snRNA-associated Sm-like protein LSm6;LSM domain 0.05 OF
SPAC2F3.17c.1 No alias U6 snRNP-associated protein Lsm6 (predicted)... 0.03 OF

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 14 82
No external refs found!