Description : Zinc finger, Sec23/Sec24-type

Gene families : OG_03_0001625 (OF) Phylogenetic Tree(s): OG0001625_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AOA69531
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AFR97534 No alias protein transporter SEC23;Sec23/Sec24 helical... 0.08 OF
CAG79640 No alias Gelsolin-like domain 0.1 OF
CAK37008 No alias Sec23/Sec24 beta-sandwich domain 0.11 OF
CBF89861 No alias Protein transport protein sec23 0.08 OF
EAA32168 No alias Sec23/Sec24 beta-sandwich 0.13 OF
EAL88052 No alias protein transport protein Sec23, putative 0.08 OF
EAU89573 No alias protein transporter SEC23 0.03 OF
EDN97626 No alias Sec23/Sec24, trunk domain 0.11 OF
EGR45004 No alias Sec23/Sec24 beta-sandwich 0.07 OF
EJF56800 No alias Gelsolin repeat 0.03 OF
ESU07283 No alias transporter SEC23 0.09 OF
KHC76645 No alias protein transporter SEC23;Sec23/Sec24 helical... 0.11 OF
POV95408 No alias Zinc finger, Sec23/Sec24-type;Gelsolin-like... 0.02 OF
SPBC776.04.1 No alias COPII cargo receptor subunit Sec23b (predicted)... 0.02 OF
SPCC31H12.07.1 No alias COPII cargo receptor subunit Sec23a (predicted)... 0.02 OF
YPR181C No alias GTPase-activating protein, stimulates the GTPase... 0.08 OF

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006896 Sec23/24_trunk_dom 122 399
IPR006900 Sec23/24_helical_dom 528 627
IPR012990 Sec23_24_beta_S 415 516
IPR006895 Znf_Sec23_Sec24 54 92
No external refs found!