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  5. AOA65808

AOA65808


Description : RNA polymerase, beta subunit, protrusion


Gene families : OG_03_0002544 (OF) Phylogenetic Tree(s): OG0002544_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AOA65808
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AFR95897 No alias DNA-directed RNA polymerase I subunit RPA2;RNA... 0.23 OF
CAG79343 No alias DNA-directed RNA polymerase, subunit 2, hybrid-binding domain 0.23 OF
CAK45911 No alias RNA polymerase Rpb2, domain 2 0.2 OF
EAA35588 No alias RNA polymerase Rpb2, domain 3 0.31 OF
EAL88681 No alias DNA-directed RNA polymerase I subunit beta (Rpa2), putative 0.21 OF
EAU84409 No alias DNA-directed RNA polymerase I polypeptide 2 0.12 OF
EGR46237 No alias RNA polymerase Rpb2, domain 7 0.18 OF
EJF62231 No alias RNA polymerase Rpb2, domain 6 0.13 OF
ESU11614 No alias DNA-directed RNA polymerase I polypeptide 2 0.24 OF
KHC71751 No alias DNA-directed RNA polymerase I subunit RPA2;"RNA... 0.23 OF
MGG_01572T0 No alias DNA-directed RNA polymerase I subunit RPA2... 0.25 OF
POV94492 No alias DNA-directed RNA polymerase, subunit 2, hybrid-binding... 0.09 OF
POW10317 No alias RNA polymerase Rpb2, domain 3;DNA-directed RNA... 0.12 OF
SPBP23A10.07.1 No alias DNA-directed RNA polymerase I complex subunit Rpa2... 0.12 OF
YPR010C No alias RNA polymerase I second largest subunit A135... 0.14 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009674 Rpa2_dom_4 567 624
IPR007641 RNA_pol_Rpb2_7 1039 1160
IPR007645 RNA_pol_Rpb2_3 462 526
IPR007120 DNA-dir_RNAP_su2_dom 673 1037
IPR007642 RNA_pol_Rpb2_2 189 377
IPR007644 RNA_pol_bsu_protrusion 30 413
No external refs found!