ESU17862

Description : ATP-dependent rRNA helicase SPB4

Gene families : OG_03_0001713 (OF) Phylogenetic Tree(s): OG0001713_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ESU17862
Cluster	HCCA: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
AFR99058	No alias	ATP-dependent rRNA helicase SPB4;DEAD/DEAH box...	0.23	OF
AOA66571	No alias	DEAD/DEAH box helicase domain	0.1	OF
CAG78378	No alias	Helicase, C-terminal	0.38	OF
CAK44325	No alias	Domain of unknown function (DUF4217)	0.42	OF
CBF83255	No alias	ATP-dependent rRNA helicase spb4	0.27	OF
EAA27591	No alias	Domain of unknown function DUF4217	0.5	OF
EAL92256	No alias	DEAD/DEAH box helicase (Sbp4), putative	0.46	OF
EAU84793	No alias	ATP-dependent rRNA helicase spb4	0.03	OF
EDN96015	No alias	DEAD/DEAH box helicase domain	0.09	OF
EED54803	No alias	DEAD/DEAH box helicase (Sbp4), putative	0.1	OF
EGR48591	No alias	Domain of unknown function DUF4217	0.32	OF
KHC75063	No alias	ATP-dependent rRNA helicase SPB41;Helicase conserved...	0.19	OF
POV95204	No alias	Domain of unknown function DUF4217;DEAD/DEAH box...	0.02	OF
SPBC24C6.02.1	No alias	ATP-dependent RNA helicase Spb4 (predicted)...	0.26	OF
YFL002C	No alias	Putative ATP-dependent RNA helicase; nucleolar protein...	0.26	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	280	394
IPR025313	DUF4217	443	500
IPR011545	DEAD/DEAH_box_helicase_dom	38	233

External Links

No external refs found!