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Gene | FB cap+lamellae,YMG,strain #326 | FB stipe,YMG,strain #326 | Hyphal knots,control,strain #326 | Mycelium | Mycelium,Co-culture B.subtilis,28C,8h | Mycelium,Co-culture E.coli,28C,8h | Mycelium,LiCl,strain #326 | Mycelium,Predation A.avenae,20h,matA/matB KO | Mycelium,Predation A.avenae,2h,matA/matB KO | Mycelium,Predation A.avenae,8h,matA/matB KO | Mycelium,control,20C,matA/matB KO | Mycelium,control,28C,8h | Mycelium,control,strain #326 | Stg 1 primordium,YMG,strain #326 | Stg 2 primordium,YMG,strain #326 | Mycelium,Co-culture B.subtilis,YMG,strain #130 | Mycelium,Co-culture E.coli,YMG,strain #130 | Mycelium,Dark 37C 96h,YMG,matA43/matB43 KO | Mycelium,Dark 37h 120h,YMG,strain #130 | Mycelium,Mechanical damage,YMG,strain #130 | Mycelium,Predation A.avenae,YMG,strain #130 | Mycelium,Predation C.elegans,YMG,strain #130 | Vegetative mycelium,YMG,strain #326 | Mycelium,control,YMG,37C,strain #130 | YFB cap,YMG,strain #326 | YFB lamellae,YMG,strain #326 | secondary hyphal knots,YMG,strain #326 | strain #130 |
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0.05 | 0.08 | 0.0 | 0.41 | 0.53 | 6.74 | 0.03 | 1.03 | 0.18 | 0.63 | 0.06 | 0.0 | 0.0 | 0.11 | 0.42 | 0.21 | 0.07 | 0.15 | 0.67 | 0.0 | 0.23 | 0.0 | 0.22 | 0.07 | 0.63 | 4.24 | 0.28 | 0.19 | |
0.05 | 0.22 | 0.05 | 0.1 | 0.09 | 0.34 | 0.11 | 0.18 | 0.08 | 0.15 | 0.16 | 0.05 | 0.03 | 0.11 | 0.1 | 0.04 | 0.03 | 0.42 | 0.0 | 0.04 | 0.06 | 0.0 | 0.09 | 0.04 | 0.02 | 0.1 | 0.13 | 0.0 | |
0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | |
0.0 | 0.03 | 0.0 | 0.06 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.05 | 0.04 | 0.03 | 0.02 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.03 | 0.0 | 0.14 | 0.13 | 0.0 | 0.0 | |
0.0 | 0.02 | 0.0 | 0.08 | 0.0 | 0.0 | 0.03 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.17 | 0.03 | 0.04 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.07 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | |
0.29 | 1.13 | 1.0 | 1.29 | 1.11 | 1.57 | 1.81 | 0.45 | 0.8 | 0.67 | 0.66 | 0.76 | 1.22 | 0.61 | 0.78 | 1.04 | 1.26 | 0.74 | 1.73 | 1.12 | 0.44 | 1.11 | 0.66 | 0.5 | 0.72 | 1.04 | 0.82 | 1.19 | |
0.28 | 1.2 | 1.46 | 2.23 | 5.81 | 14.59 | 3.16 | 0.65 | 1.37 | 1.24 | 1.09 | 2.76 | 1.9 | 1.45 | 2.05 | 3.77 | 5.67 | 2.45 | 1.74 | 1.94 | 2.84 | 1.55 | 3.57 | 1.48 | 0.61 | 1.64 | 2.66 | 3.35 | |
3.22 | 3.53 | 1.15 | 7.3 | 38.21 | 83.81 | 6.77 | 4.01 | 2.04 | 2.89 | 1.9 | 3.65 | 2.06 | 3.46 | 3.48 | 4.08 | 3.83 | 0.97 | 1.35 | 3.27 | 0.58 | 3.52 | 4.52 | 1.95 | 1.93 | 2.22 | 2.42 | 5.03 | |
19.42 | 18.87 | 59.06 | 64.49 | 103.4 | 153.03 | 65.48 | 49.64 | 60.67 | 51.29 | 59.7 | 79.16 | 41.82 | 59.26 | 56.64 | 74.35 | 69.05 | 30.68 | 80.04 | 64.39 | 45.07 | 72.81 | 60.75 | 63.66 | 18.74 | 26.57 | 55.12 | 86.87 | |
0.03 | 1.13 | 2.26 | 1.89 | 1.85 | 1.35 | 3.23 | 2.45 | 2.49 | 4.01 | 3.1 | 2.3 | 1.52 | 5.39 | 4.55 | 1.66 | 0.68 | 0.63 | 1.29 | 2.04 | 0.76 | 1.09 | 0.83 | 1.44 | 0.5 | 1.55 | 3.67 | 1.66 | |
3.31 | 0.47 | 3.36 | 3.83 | 12.09 | 14.81 | 7.84 | 2.11 | 2.08 | 4.5 | 1.63 | 1.24 | 2.73 | 0.89 | 1.15 | 3.99 | 3.71 | 2.14 | 4.14 | 6.35 | 4.49 | 3.7 | 2.17 | 5.97 | 1.16 | 9.09 | 1.25 | 3.27 | |
0.19 | 0.59 | 0.68 | 0.74 | 0.29 | 0.28 | 0.33 | 0.34 | 0.38 | 0.35 | 0.45 | 0.29 | 0.34 | 0.57 | 0.61 | 0.33 | 0.15 | 0.4 | 0.08 | 0.38 | 0.25 | 0.44 | 0.57 | 0.23 | 0.05 | 0.15 | 0.55 | 0.46 | |
0.0 | 0.0 | 0.0 | 0.04 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | |
0.01 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | |
43.23 | 10.22 | 1.19 | 23.32 | 22.19 | 69.29 | 34.24 | 10.49 | 1.45 | 12.49 | 2.02 | 2.64 | 5.2 | 1.94 | 2.1 | 9.51 | 9.42 | 4.65 | 2.25 | 7.52 | 1.16 | 5.77 | 4.0 | 5.18 | 1.83 | 0.56 | 1.89 | 5.65 | |
281.05 | 722.73 | 363.65 | 962.8 | 1517.07 | 2493.76 | 1115.93 | 567.26 | 597.81 | 927.38 | 713.75 | 1466.65 | 671.88 | 863.43 | 889.65 | 1042.39 | 1185.87 | 611.26 | 2071.58 | 829.83 | 454.11 | 1052.97 | 1879.44 | 996.56 | 129.11 | 275.03 | 699.43 | 612.54 | |
19.6 | 32.97 | 21.68 | 78.42 | 149.31 | 312.38 | 71.87 | 42.26 | 42.77 | 53.84 | 46.65 | 72.54 | 42.56 | 70.06 | 73.46 | 109.14 | 101.07 | 41.24 | 42.49 | 79.85 | 53.83 | 88.8 | 79.03 | 68.85 | 19.89 | 106.03 | 53.26 | 156.58 | |
32.54 | 38.07 | 19.31 | 79.95 | 50.2 | 115.21 | 80.74 | 22.9 | 32.31 | 55.44 | 14.87 | 27.7 | 45.95 | 47.85 | 49.64 | 24.67 | 32.58 | 43.31 | 21.27 | 32.53 | 18.85 | 33.45 | 39.38 | 29.78 | 60.25 | 28.07 | 65.06 | 160.83 | |
3.27 | 6.43 | 18.01 | 29.93 | 32.56 | 67.98 | 27.44 | 17.87 | 24.21 | 19.67 | 20.52 | 32.26 | 19.62 | 12.64 | 13.43 | 31.67 | 30.32 | 11.41 | 11.12 | 29.9 | 18.73 | 32.24 | 20.31 | 27.05 | 4.71 | 20.29 | 12.8 | 32.36 | |
5.36 | 4.09 | 1.32 | 12.2 | 10.53 | 18.46 | 4.15 | 1.6 | 3.25 | 1.47 | 4.38 | 13.07 | 4.16 | 7.3 | 8.75 | 5.3 | 5.47 | 2.84 | 2.53 | 3.5 | 2.03 | 5.49 | 2.91 | 2.77 | 28.12 | 7.96 | 3.68 | 14.71 | |
10.74 | 19.05 | 29.37 | 43.27 | 58.39 | 50.78 | 39.21 | 15.63 | 19.4 | 14.7 | 23.73 | 61.02 | 43.19 | 45.53 | 49.7 | 39.37 | 36.68 | 76.26 | 96.52 | 30.25 | 35.68 | 31.07 | 63.27 | 38.19 | 10.37 | 26.56 | 33.28 | 33.21 | |
5.91 | 2.76 | 21.3 | 58.1 | 44.01 | 32.78 | 34.69 | 11.12 | 13.45 | 23.9 | 16.24 | 33.16 | 41.84 | 18.28 | 23.22 | 14.88 | 19.93 | 34.92 | 7.04 | 22.31 | 13.61 | 20.78 | 49.95 | 15.85 | 17.13 | 7.18 | 31.46 | 23.89 | |
15.11 | 65.98 | 52.53 | 79.71 | 85.01 | 117.93 | 93.13 | 76.96 | 83.18 | 85.34 | 79.98 | 99.35 | 76.59 | 116.81 | 131.48 | 68.62 | 60.55 | 121.24 | 121.73 | 57.56 | 52.61 | 62.8 | 136.8 | 60.34 | 43.37 | 54.33 | 86.04 | 75.32 | |
1.46 | 17.6 | 14.0 | 23.04 | 20.76 | 26.85 | 18.31 | 16.5 | 21.05 | 22.51 | 22.33 | 19.17 | 20.43 | 18.76 | 17.94 | 19.25 | 19.8 | 17.22 | 11.05 | 21.62 | 24.03 | 21.97 | 19.97 | 21.37 | 6.11 | 15.62 | 13.57 | 18.78 | |
2.21 | 3.07 | 2.04 | 31.91 | 24.36 | 53.57 | 14.48 | 4.68 | 2.07 | 2.51 | 2.75 | 8.01 | 7.1 | 1.68 | 1.78 | 90.5 | 71.8 | 27.58 | 39.52 | 47.36 | 25.95 | 52.5 | 7.85 | 37.71 | 1.65 | 1.43 | 2.35 | 58.38 | |
0.32 | 0.68 | 0.9 | 0.96 | 0.31 | 0.15 | 0.38 | 0.59 | 1.14 | 0.84 | 1.33 | 0.38 | 0.29 | 0.59 | 0.64 | 0.13 | 0.28 | 0.59 | 0.56 | 0.37 | 0.5 | 0.36 | 0.93 | 0.48 | 0.31 | 0.45 | 1.32 | 0.16 | |
0.0 | 0.0 | 0.0 | 0.36 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.24 | 0.0 | 0.0 | 0.0 | 0.0 | 0.03 | 0.0 | 0.0 | 0.0 | 0.0 | |
0.0 | 0.0 | 0.0 | 1.63 | 0.04 | 0.0 | 0.0 | 0.0 | 0.0 | 0.04 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.09 | 0.0 | 0.0 | 0.0 | 0.12 | |
0.02 | 0.03 | 0.86 | 0.76 | 0.36 | 0.36 | 1.27 | 0.36 | 0.64 | 0.79 | 0.41 | 0.45 | 0.86 | 0.05 | 0.07 | 0.05 | 0.05 | 0.29 | 0.18 | 0.17 | 0.0 | 0.23 | 0.47 | 0.12 | 0.01 | 0.02 | 0.17 | 0.06 | |
29.73 | 81.11 | 19.03 | 163.53 | 116.61 | 235.99 | 135.47 | 75.45 | 45.98 | 106.51 | 47.95 | 87.94 | 84.9 | 114.44 | 117.17 | 224.04 | 170.22 | 52.08 | 99.55 | 155.77 | 142.89 | 168.29 | 89.48 | 122.89 | 16.72 | 34.71 | 78.92 | 260.56 | |
19.17 | 32.25 | 26.98 | 44.02 | 48.33 | 86.57 | 51.16 | 24.49 | 35.47 | 29.18 | 29.94 | 36.63 | 25.09 | 26.02 | 30.9 | 27.57 | 32.62 | 21.87 | 11.95 | 33.12 | 23.59 | 33.71 | 57.98 | 27.62 | 59.97 | 61.36 | 26.29 | 62.98 | |
0.0 | 0.0 | 0.0 | 0.03 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.03 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.12 | 0.0 | 0.05 | 0.04 | 0.0 | 0.0 | |
24.57 | 7.03 | 37.77 | 42.1 | 62.77 | 74.28 | 56.15 | 60.63 | 30.7 | 48.6 | 29.41 | 14.73 | 70.02 | 12.96 | 16.55 | 73.41 | 44.47 | 84.6 | 43.32 | 48.63 | 36.41 | 49.35 | 44.66 | 38.56 | 4.5 | 17.83 | 35.07 | 35.2 | |
0.14 | 0.25 | 0.51 | 1.17 | 3.22 | 5.51 | 0.8 | 0.35 | 1.03 | 1.38 | 1.38 | 1.85 | 1.14 | 1.71 | 1.84 | 1.41 | 1.07 | 0.99 | 0.87 | 1.73 | 0.53 | 1.34 | 0.57 | 1.18 | 0.12 | 4.52 | 1.66 | 1.9 | |
2.82 | 6.06 | 4.93 | 16.21 | 12.85 | 46.92 | 9.8 | 10.33 | 3.45 | 4.72 | 3.53 | 8.84 | 8.26 | 21.74 | 19.19 | 3.61 | 6.62 | 32.59 | 1.13 | 1.08 | 0.69 | 2.99 | 11.47 | 0.91 | 13.48 | 3.63 | 26.06 | 6.47 | |
0.74 | 0.15 | 2.17 | 3.0 | 4.3 | 11.47 | 3.38 | 0.84 | 1.09 | 1.32 | 1.33 | 3.55 | 2.28 | 0.93 | 1.29 | 1.1 | 2.08 | 1.13 | 0.98 | 1.78 | 0.69 | 1.26 | 2.22 | 1.08 | 0.22 | 2.57 | 1.3 | 3.22 | |
15.06 | 13.76 | 30.93 | 36.91 | 43.02 | 72.43 | 37.87 | 17.82 | 25.88 | 19.29 | 29.35 | 33.77 | 35.85 | 20.15 | 22.56 | 26.47 | 27.01 | 19.94 | 28.34 | 31.72 | 25.31 | 31.21 | 20.57 | 27.71 | 13.54 | 21.28 | 22.36 | 37.25 | |
0.31 | 0.71 | 0.4 | 1.1 | 5.06 | 8.52 | 0.69 | 9.23 | 0.86 | 1.64 | 0.71 | 1.07 | 0.27 | 0.47 | 0.33 | 0.22 | 0.18 | 0.48 | 0.26 | 0.12 | 1.21 | 0.21 | 0.51 | 0.21 | 0.05 | 8.11 | 0.72 | 2.27 | |
11.74 | 14.58 | 21.43 | 17.54 | 30.85 | 73.34 | 14.03 | 13.55 | 6.21 | 10.1 | 4.35 | 12.68 | 15.71 | 12.58 | 15.35 | 28.41 | 19.67 | 8.35 | 4.63 | 24.37 | 20.92 | 19.72 | 21.45 | 11.89 | 9.11 | 77.75 | 18.32 | 8.82 | |
0.0 | 0.0 | 180.3 | 738.11 | 456.48 | 1753.51 | 328.87 | 131.89 | 44.54 | 298.58 | 94.96 | 387.14 | 348.11 | 9.14 | 43.36 | 250.63 | 646.71 | 7.64 | 474.95 | 260.83 | 150.91 | 251.41 | 103.62 | 270.5 | 8.23 | 0.0 | 7.19 | 456.82 | |
0.38 | 0.57 | 2.53 | 30.89 | 4.51 | 9.41 | 12.42 | 4.52 | 7.67 | 7.45 | 2.35 | 1.59 | 17.21 | 1.32 | 2.66 | 5.38 | 5.3 | 9.43 | 3.29 | 2.98 | 1.72 | 3.75 | 7.29 | 2.51 | 0.71 | 0.84 | 3.35 | 29.06 | |
24.05 | 9.24 | 2.79 | 84.52 | 76.59 | 287.59 | 96.07 | 11.11 | 2.56 | 18.68 | 2.0 | 6.72 | 7.99 | 7.05 | 13.22 | 17.57 | 25.36 | 9.27 | 8.2 | 10.89 | 5.22 | 12.43 | 24.97 | 8.28 | 23.09 | 5.05 | 4.56 | 92.39 | |
1.34 | 3.42 | 3.64 | 11.17 | 15.86 | 32.76 | 9.97 | 5.97 | 7.19 | 8.11 | 6.02 | 6.77 | 8.1 | 2.43 | 3.67 | 10.21 | 10.99 | 5.88 | 4.83 | 9.7 | 5.33 | 9.6 | 5.69 | 9.46 | 4.17 | 13.49 | 2.55 | 14.63 | |
169.93 | 213.38 | 152.52 | 248.65 | 466.43 | 455.42 | 301.02 | 216.62 | 156.37 | 162.83 | 135.48 | 202.19 | 222.64 | 226.79 | 272.42 | 353.25 | 288.71 | 172.47 | 85.5 | 276.37 | 195.99 | 295.69 | 363.81 | 235.5 | 150.75 | 190.92 | 470.5 | 339.82 | |
0.0 | 0.45 | 0.1 | 0.42 | 0.09 | 0.42 | 0.69 | 0.26 | 0.16 | 0.18 | 0.0 | 0.0 | 1.14 | 0.2 | 0.28 | 0.19 | 0.38 | 0.21 | 0.0 | 0.22 | 0.0 | 0.91 | 0.12 | 0.0 | 0.08 | 0.0 | 0.1 | 0.78 | |
0.74 | 2.73 | 0.43 | 4.77 | 4.2 | 13.69 | 2.76 | 0.97 | 0.65 | 1.67 | 0.7 | 0.89 | 0.82 | 1.48 | 1.44 | 0.78 | 0.79 | 0.95 | 0.38 | 0.62 | 0.57 | 0.54 | 1.65 | 0.36 | 2.48 | 2.44 | 0.95 | 0.66 | |
0.0 | 0.0 | 0.0 | 0.02 | 0.0 | 0.23 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | |
0.0 | 0.04 | 0.08 | 0.1 | 0.0 | 0.04 | 0.0 | 0.0 | 0.03 | 0.0 | 0.0 | 0.0 | 0.0 | 0.06 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.15 | 0.0 | 0.0 | 0.0 | |
0.2 | 0.36 | 1.35 | 3.31 | 0.38 | 0.22 | 1.59 | 0.31 | 1.93 | 0.75 | 1.47 | 0.7 | 1.04 | 0.69 | 0.94 | 0.0 | 0.0 | 2.18 | 0.0 | 0.0 | 0.0 | 0.0 | 1.62 | 0.0 | 0.19 | 0.43 | 0.98 | 0.0 | |
53.61 | 28.54 | 36.03 | 74.44 | 87.82 | 116.56 | 33.93 | 55.83 | 38.75 | 40.41 | 43.02 | 60.34 | 41.27 | 36.03 | 38.96 | 80.04 | 59.8 | 83.3 | 88.46 | 66.5 | 62.07 | 72.93 | 48.95 | 64.69 | 44.8 | 82.64 | 46.62 | 56.71 | |
10.28 | 10.65 | 22.45 | 33.8 | 37.43 | 56.79 | 28.49 | 29.44 | 39.36 | 30.76 | 38.59 | 32.83 | 23.2 | 45.49 | 42.55 | 42.19 | 31.06 | 29.59 | 24.77 | 44.9 | 36.72 | 36.66 | 34.19 | 37.21 | 14.71 | 27.12 | 42.09 | 46.44 | |
1.32 | 4.65 | 16.71 | 38.67 | 60.95 | 112.08 | 25.76 | 10.34 | 17.96 | 15.96 | 16.88 | 47.2 | 18.49 | 5.67 | 8.72 | 26.73 | 28.49 | 11.56 | 9.24 | 25.12 | 17.24 | 28.19 | 38.91 | 24.86 | 0.18 | 2.09 | 8.41 | 45.86 | |
8.08 | 14.86 | 2.48 | 11.45 | 1.82 | 1.55 | 63.34 | 1.72 | 1.44 | 6.16 | 1.44 | 0.46 | 2.12 | 78.48 | 75.94 | 2.82 | 2.23 | 1.97 | 1.58 | 2.91 | 4.74 | 3.33 | 1.34 | 2.35 | 51.99 | 3.64 | 63.47 | 5.78 | |
3.03 | 1.46 | 3.53 | 11.45 | 8.44 | 21.43 | 3.21 | 0.87 | 0.26 | 2.9 | 0.34 | 1.23 | 1.41 | 0.92 | 1.68 | 3.87 | 2.22 | 0.31 | 1.61 | 2.34 | 1.5 | 2.9 | 1.01 | 1.94 | 2.72 | 0.39 | 1.44 | 5.96 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)