Heatmap: Cluster_38 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
FB cap+lamellae,YMG,strain #326
FB stipe,YMG,strain #326
Hyphal knots,control,strain #326
Mycelium
Mycelium,Co-culture B.subtilis,28C,8h
Mycelium,Co-culture E.coli,28C,8h
Mycelium,LiCl,strain #326
Mycelium,Predation A.avenae,20h,matA/matB KO
Mycelium,Predation A.avenae,2h,matA/matB KO
Mycelium,Predation A.avenae,8h,matA/matB KO
Mycelium,control,20C,matA/matB KO
Mycelium,control,28C,8h
Mycelium,control,strain #326
Stg 1 primordium,YMG,strain #326
Stg 2 primordium,YMG,strain #326
Mycelium,Co-culture B.subtilis,YMG,strain #130
Mycelium,Co-culture E.coli,YMG,strain #130
Mycelium,Dark 37C 96h,YMG,matA43/matB43 KO
Mycelium,Dark 37h 120h,YMG,strain #130
Mycelium,Mechanical damage,YMG,strain #130
Mycelium,Predation A.avenae,YMG,strain #130
Mycelium,Predation C.elegans,YMG,strain #130
Vegetative mycelium,YMG,strain #326
Mycelium,control,YMG,37C,strain #130
YFB cap,YMG,strain #326
YFB lamellae,YMG,strain #326
secondary hyphal knots,YMG,strain #326
strain #130
- -4.13 -1.65 0.03 - - -3.7 - - - -0.97 -2.97 - - -1.48 1.55 1.01 0.57 - 2.74 0.07 2.2 -3.38 2.11 - - -1.66 1.03
- - -6.74 1.1 - - - - - - - - - - - 2.24 1.26 - 1.3 1.92 1.6 1.62 - 1.68 - - - 1.68
- - - 2.12 - - - - - - - - - - - - 1.31 - - 0.38 - 2.02 - 2.44 - - - 3.38
-0.06 -2.12 - 0.37 - - -1.02 - -2.07 -2.0 - - - - -2.91 2.06 1.88 -0.75 0.03 2.28 1.94 1.66 - 0.12 -2.26 - -1.83 0.57
-4.84 -5.87 -1.25 0.84 1.04 1.04 -0.06 -3.88 -3.32 -3.38 -2.82 0.01 -0.12 -4.97 -3.73 2.25 1.72 -2.36 0.72 1.26 -0.72 1.13 -1.29 0.26 -3.13 -5.31 -2.02 0.18
-0.4 -0.94 -1.06 0.83 -0.2 -0.5 -0.44 -0.65 -0.13 -0.16 0.24 -0.13 -0.11 0.08 0.02 0.03 -0.15 -0.01 0.43 -0.23 -0.37 0.34 -0.32 0.09 -1.7 0.57 0.41 1.31
-0.84 -0.54 -0.33 0.28 -0.01 0.02 0.09 -0.39 -0.38 -0.5 -0.3 -0.26 0.31 -0.17 -0.36 0.82 0.43 -0.65 -0.63 0.6 0.8 0.56 -0.24 0.46 -0.58 0.02 -0.34 0.08
- -4.82 -3.3 0.88 -3.13 -3.39 -2.96 -2.66 -2.98 -2.12 -2.02 -3.06 -2.56 -6.83 -6.83 1.81 1.1 -3.21 0.97 1.94 1.27 1.94 - 1.58 - - -5.88 1.93
- - - -0.2 - - - - - - - - - - - 1.68 2.78 - 1.73 1.97 0.96 1.29 - 1.36 - - - 1.49
-2.54 -1.78 -1.51 0.57 -1.52 -0.98 -0.61 -0.86 -0.75 -0.83 -0.64 -1.45 -1.0 -0.85 -1.1 0.98 0.87 1.05 0.65 1.24 1.21 0.9 -1.49 0.96 -2.72 -1.48 -0.71 1.35
-4.16 -1.91 -0.51 -0.16 -1.57 -0.84 -1.62 -1.79 -1.04 -0.9 -1.88 -1.23 -0.79 -1.22 -1.64 1.58 1.35 -0.44 0.9 1.35 1.15 1.39 -1.79 1.3 -3.11 -0.59 -1.01 0.96
-1.42 -0.77 0.49 0.85 -0.81 -1.79 -0.3 -0.22 0.12 -0.68 0.16 -1.47 0.31 -0.77 -0.62 0.56 0.09 1.63 -0.24 0.61 0.65 0.4 -0.28 0.19 -1.02 0.01 -0.74 -0.51
-6.16 -5.28 - 1.08 - - - - - - - - - - - 1.6 1.9 - -0.36 1.64 1.7 1.3 - 1.36 -5.99 - -5.53 2.79
-5.02 -5.73 -0.27 0.87 -4.75 -4.69 -1.97 -2.78 -0.28 -1.17 -0.41 -2.77 -1.93 -2.63 -2.33 1.38 1.13 0.97 1.28 1.62 0.94 1.3 -2.14 1.13 -2.87 -0.24 -1.64 0.74
- - - 0.42 - - - - - - - - - - - 2.19 1.72 - 1.41 2.17 1.63 1.82 - 1.76 - - - 0.72
- - -8.46 0.74 - - -7.95 - - - - - - - - 1.62 1.36 - 1.68 1.81 1.76 1.78 - 1.78 - - - 1.9
-1.42 -2.3 0.47 1.33 -0.92 -0.87 -0.03 -0.48 -0.08 -0.19 -1.12 -1.2 -1.35 -1.66 -1.67 0.08 0.1 0.1 -0.79 1.35 1.27 1.08 0.71 0.29 -2.72 -1.08 -1.39 1.21
0.49 -1.11 -2.79 2.0 -3.72 -1.93 -2.38 -4.97 -4.95 -3.11 -4.96 -5.26 -2.04 -1.89 -2.01 0.25 -0.03 -0.31 1.04 0.61 0.43 0.91 -4.04 0.62 -1.84 -2.29 -0.41 2.97
1.76 0.0 -1.77 2.01 -3.68 -3.64 -1.46 -1.76 -1.64 -0.73 -1.79 -3.38 -1.07 -0.33 -0.4 -0.24 -0.77 -0.91 1.12 0.26 0.24 0.71 -2.13 0.74 -0.47 -0.9 -0.76 1.69
-6.65 -7.42 -1.43 1.75 -1.93 -4.37 -1.18 -1.81 -2.29 -2.99 -2.79 -2.89 0.05 -4.18 -4.44 1.26 0.9 1.4 0.01 1.51 1.11 1.25 -0.87 1.2 -6.66 -2.65 -1.57 1.49
- - - 1.44 - - - - - - - - - - - 1.28 0.93 - 2.77 1.58 0.85 1.77 - 1.73 - - - 1.39
-0.61 -1.74 -0.55 0.24 -2.34 -1.48 -2.27 1.35 -0.56 0.4 -0.61 -2.26 -2.38 -1.57 -1.34 0.98 0.64 0.0 0.38 0.96 1.63 1.02 -0.77 1.05 -1.44 -1.39 -1.84 0.58
1.15 -3.56 -0.22 0.98 -1.17 -0.94 -0.88 -1.74 -1.96 -2.33 -1.56 -1.72 -0.88 -1.68 -1.73 1.03 0.59 0.69 1.15 0.91 0.91 0.95 -1.06 1.06 -5.12 -2.14 -1.52 1.37
- - - 0.39 - - - - - - - - - - - 1.6 1.81 - 1.27 1.84 1.9 2.02 - 2.12 - - - 1.02
-3.73 -3.16 -0.32 0.08 -0.66 -0.5 -0.83 0.26 0.01 0.9 0.25 -0.93 -0.42 -0.95 -1.09 1.17 0.71 0.35 -0.1 1.05 0.72 0.89 -0.67 0.6 -3.68 -2.51 -0.71 0.89
-3.29 -4.26 0.24 0.8 -1.74 -2.5 1.96 -1.48 -0.81 -1.32 -0.77 -1.76 0.25 -1.71 -1.69 0.47 0.48 -0.18 0.06 0.82 1.02 0.82 -1.18 0.66 -3.88 -0.01 -0.98 1.43
- - - 0.64 - - -8.13 - - - - - - - - 1.81 1.28 - 1.63 1.98 1.89 1.85 - 1.93 - - - 1.25
- - - 0.07 - - -9.32 - - - - - - - - 1.71 1.41 - 1.29 1.97 1.81 1.7 - 1.88 - - - 2.07
- - - 0.9 - - - - - - - - - - - -0.15 1.2 - 1.96 2.07 2.31 1.88 - 2.4 - - - -0.08
-7.76 -5.75 -2.31 0.05 -3.51 -3.19 -3.43 -3.21 -3.38 -3.06 -3.47 -4.07 -3.68 -4.1 -4.14 1.73 0.94 - 0.84 2.33 1.65 1.91 -4.29 1.9 -4.17 -4.6 -4.41 1.53
-1.56 0.62 -2.48 0.01 - - -2.66 -2.85 -1.82 - -1.8 - -2.81 -0.04 -0.1 1.37 - -1.58 1.36 2.33 1.9 1.21 - 1.45 -0.61 -3.17 -2.54 0.87
- - - 0.93 - - - - - - - - - - - 1.57 0.46 - 1.29 2.16 2.17 2.07 - 1.36 - - - 1.84
-6.29 -7.18 -3.72 -0.24 -3.13 -4.97 -4.07 -3.98 -2.82 -2.91 -3.02 - -6.01 -4.05 - 1.45 0.92 -2.41 1.19 2.29 1.89 1.94 -5.39 1.83 -5.16 -3.72 -4.74 1.62
-1.95 -0.54 -4.02 0.77 -4.32 -3.26 -1.11 -1.25 -0.48 -2.49 -0.04 -1.15 -1.66 -0.76 -0.49 0.57 -1.09 -2.08 0.76 1.68 1.46 0.25 -1.82 0.99 -3.44 -4.48 -1.9 2.72
-2.7 -1.6 -0.6 0.03 -0.84 -1.57 -0.84 -0.2 -0.33 -0.16 -0.2 -0.58 -1.0 -1.37 -0.94 0.71 0.02 1.48 -1.44 1.44 1.32 1.16 -0.06 0.92 -3.7 -3.44 -1.42 1.16
-2.84 -2.11 -2.06 0.09 -1.06 -1.0 -1.14 -1.28 -0.89 -0.29 -0.89 -0.76 -0.41 -0.58 -0.69 0.97 1.03 -0.45 0.25 1.4 1.11 1.34 -0.91 1.26 -0.48 -1.08 -1.13 1.09
-0.94 -5.52 -1.48 1.02 -1.78 -4.55 -1.51 1.47 0.15 -0.05 0.44 -1.22 -3.07 -4.07 -3.45 1.8 0.7 -1.06 -0.13 1.19 1.41 1.24 -1.4 0.99 -5.9 -1.28 -4.27 -0.26
-2.48 -2.42 -0.29 0.57 -0.86 -1.12 -0.8 -0.17 -0.22 -0.09 0.42 -0.58 -1.21 0.49 0.07 -0.03 -0.98 -0.55 -0.11 0.87 0.16 0.22 -1.06 0.12 -0.51 0.32 0.83 1.87
- - - -0.2 - - - - -6.33 - - - - -7.03 - 1.17 0.99 -3.43 1.9 2.0 2.07 1.92 - 2.17 -4.92 - -6.1 1.33
- - - 1.87 - - - - - - - - - - - 0.93 1.22 - 0.68 0.91 1.87 1.0 - 0.81 - - - 3.2
- - - -0.49 - - -3.38 - -2.66 - - -1.1 - - - 1.5 1.94 -1.31 2.06 1.66 0.69 1.91 -3.15 1.65 - - - 1.83
-3.74 -4.94 -2.83 -0.67 -3.47 -2.83 -2.79 -3.21 -3.72 -2.77 -3.56 -3.49 -3.74 -1.63 -1.68 1.48 1.07 -1.55 0.79 2.17 1.7 1.98 -2.61 1.73 -4.8 -3.97 -0.41 1.34
- - - -1.35 - - - - - - - - - - - 0.92 2.15 - 2.32 1.88 - 2.49 - 2.19 - - - 1.27
-4.25 -2.47 -0.97 0.04 -0.53 -1.21 -0.97 -1.28 -0.65 -0.79 -0.46 -0.19 -0.34 -1.08 -1.14 1.23 0.57 -0.15 0.86 1.18 1.38 0.98 -1.23 0.88 -2.41 -0.41 -0.9 1.33
- -4.24 -2.55 -0.2 -3.43 -5.48 -2.59 -3.01 -2.42 -4.29 -1.82 -2.82 -4.52 -1.21 -1.96 1.66 1.29 -2.18 1.46 2.13 1.31 1.79 -2.08 1.89 -4.68 -3.13 -1.64 0.85
- - -5.07 -0.18 - - -6.08 - - - - - - - - 1.42 1.06 - 1.42 2.33 2.04 2.1 - 1.94 - - - 1.25
- - - 1.04 - - - - - - - - - - - 0.86 0.8 - 2.05 1.87 - 2.86 - 2.63 - - - 0.21
- - - 1.62 - - - - - - - - - - - 0.16 0.9 - -0.36 2.56 0.52 1.71 - 2.3 - - - 2.49
- - - 0.41 - - - - - - - - - - - 1.6 1.29 - 0.74 2.3 1.62 1.87 - 2.19 - - - 1.73
- -3.0 -0.89 -0.36 -2.52 -2.51 -1.56 -0.23 -0.01 -0.31 0.13 -2.38 -1.34 -0.47 -1.58 0.54 0.11 1.26 0.48 1.9 0.34 1.62 -1.46 1.14 -2.2 -1.82 -0.72 1.25
-3.12 -0.2 -1.22 -0.31 0.44 1.67 -1.14 0.88 -1.18 0.62 -0.46 -1.11 -3.45 -0.1 -0.03 -1.11 -0.88 0.06 0.42 1.03 0.03 0.88 -1.42 0.96 -0.63 -0.01 -0.37 -0.43
-3.68 -1.9 0.27 0.19 0.1 -0.44 -0.0 0.25 0.31 0.58 0.74 0.07 -0.57 0.44 0.25 -0.46 -1.04 -0.45 -0.84 0.29 -0.17 -0.37 -0.83 -0.4 -0.71 0.78 0.72 0.97
- - - 1.11 - - - - - - - - - - - 2.09 0.81 - 0.49 2.59 2.01 2.14 - 1.55 - - - 0.06
-3.29 0.28 0.42 0.05 -1.87 -2.8 -1.92 -2.09 -2.2 -2.24 -2.12 -3.26 -1.1 1.35 0.99 0.6 0.2 -0.06 0.71 1.11 0.78 0.95 -2.02 0.73 -0.67 -1.04 1.1 0.48
-1.82 -1.06 -3.42 0.68 -7.2 -5.45 -3.99 -8.28 -8.43 - -8.51 -5.57 -3.58 0.13 0.1 0.97 1.04 0.48 0.05 1.43 0.87 0.94 -0.82 0.83 -1.79 0.54 0.34 2.31
-3.18 -1.53 -0.58 0.75 0.76 0.35 -1.54 -1.46 -0.42 -0.28 -0.61 1.25 -1.06 -1.02 -1.15 0.3 0.72 -0.2 -0.17 1.1 0.17 0.55 -1.4 0.38 -2.71 -0.8 -1.11 1.69
- - - 0.64 - - - - - - - - - - - 2.76 0.79 - 0.09 2.05 2.27 1.71 - 1.9 - - - -0.23
- - - 2.06 - - - - - - - - - - - -0.11 1.42 - 1.47 0.94 2.0 1.59 - 1.23 - - - 2.63
-2.02 0.21 -0.06 1.13 0.33 0.28 -0.02 -0.36 -0.19 -0.13 -0.01 0.32 0.5 -0.51 -0.46 0.17 0.03 0.15 -0.24 0.04 -0.46 0.21 -0.15 0.26 -1.55 -0.73 -0.74 0.74
- - - 1.85 - - - - - - - - - - - 0.21 2.74 - -0.01 0.78 0.88 0.2 - -0.93 - - - 3.37
- - - 2.21 - - - - - - - - - - - 1.43 1.13 - 0.9 1.57 1.57 1.41 - 1.35 - - - 2.45
-0.22 0.01 0.17 0.39 0.52 0.93 0.29 -0.57 -0.33 -0.53 -0.1 0.23 0.66 -0.26 -0.33 0.09 0.07 -0.33 -1.04 0.04 0.02 -0.02 -0.27 0.06 -1.07 0.11 -0.16 -0.13
-1.15 -0.74 0.32 0.41 -0.05 -0.43 0.46 -0.56 -0.76 -0.89 -0.58 -0.37 0.58 -0.75 -0.66 0.83 0.43 -0.75 0.59 0.61 0.58 0.52 -0.14 0.46 -0.98 0.29 -1.28 0.3
-4.25 -1.8 - 0.2 -1.87 -0.93 -3.14 -0.49 -1.16 0.04 -0.51 -1.04 -2.39 -2.07 -2.17 1.03 1.33 0.15 -0.82 1.83 0.5 1.97 -1.79 1.94 - -1.4 -3.62 0.87
- - - 1.55 - - - - - - - - - - - 0.99 1.22 - 0.91 1.41 0.54 0.99 - 1.08 - - - 3.41
-2.56 -1.92 -1.36 -0.42 -2.69 -1.62 -1.59 -1.34 -0.95 -1.65 -0.66 -2.68 -1.16 -2.24 -1.94 1.19 0.84 -3.1 1.43 1.69 1.42 1.62 -0.89 1.6 -1.6 -1.82 -1.4 1.16
- - - 0.83 - - - - - - - - - - - 1.24 1.75 - 1.51 2.51 0.95 0.95 - 1.13 - - - 2.56
-2.69 0.23 -0.74 -0.15 -0.71 -0.38 -1.09 -0.94 -0.82 -1.06 -0.86 -0.49 -0.58 0.36 0.14 0.94 0.32 1.11 0.13 0.45 1.09 0.66 -0.73 0.51 -0.76 0.35 -0.23 0.29
-3.62 -2.09 -2.31 -0.59 -2.1 -1.79 -3.52 -2.38 -1.49 -2.1 -1.83 -1.62 -2.49 -2.26 -1.99 1.14 0.8 -5.87 1.53 2.08 1.64 1.73 -2.3 1.88 -1.64 -2.94 -1.77 1.03
-5.36 -7.74 - -0.06 -7.68 -4.44 -8.4 - -6.65 - - -5.13 - -6.36 -6.08 1.71 1.73 - 1.76 1.68 1.6 2.19 -6.47 2.06 -6.79 -4.37 - 0.91
-3.03 -0.57 -2.2 0.68 -1.07 -0.92 -0.76 -1.17 -0.68 -0.85 -0.57 -0.83 -0.99 -1.92 -2.26 1.3 1.06 0.14 0.42 1.19 0.86 1.1 -1.92 1.25 -0.54 -1.82 -0.99 1.38
- -5.06 -2.74 0.75 -2.49 -4.02 -1.16 -2.44 -4.05 -1.16 -1.47 -1.79 -1.26 - -3.82 1.28 1.25 -0.72 2.08 1.15 1.22 1.77 -2.14 1.05 -3.21 - - 1.86
- - - 0.06 - - - - - - - - - - - 2.2 0.95 - 1.65 1.95 2.34 1.87 - 1.66 - - - 0.61
- - - 1.78 - - - - - - - - - - - 0.88 1.53 - 0.45 1.99 0.6 1.76 - 1.74 - - - 2.64

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.