Heatmap: Cluster_19 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
infectn,Str1980
Str02-05,ctrl
2n,asex,PDagar,soybean
Str1980,tomato
Str1980,sunflower
Str1980,thalecress
sporeRelease,StrEp
StrEpT1
StrDK3,soybean
virus,soybean
invitro,ctrl
2n,infectn,asex,rapeseed
2n,asex,invitro,PDbroth,rapeseed
PDbroth,Str1980,ctrl
MM,Str1980,ctrl
PDagar,Str1980,border
PDagar,Str1980,center
infectn,virus,StrEp
infectn,noVirus,StrEp
infectn,Str1980,rapeseed
invitro,rapeseed
48hpi,suscept,rapeseed
48hpi,resist,rapeseed
- 1.62 - - - - - - - 1.43 - - 1.72 1.36 2.14 0.39 - - 0.58 2.05 - - -
- - 3.64 - - 1.22 - - - 1.61 - - - - 0.73 - 0.42 - 0.75 -1.12 - - -
- - - - - - - - - - - - - - - - - - - - - - -
- - 2.5 0.15 - - - - - - 0.22 0.05 0.63 1.81 0.58 0.43 - - - 1.29 1.89 - -
0.49 0.12 1.89 -0.4 0.35 -0.34 0.89 -1.54 -0.61 -0.42 -0.24 -0.74 0.32 -1.01 1.07 -0.84 -0.03 -2.1 -4.35 0.45 0.41 -0.81 -
1.1 -0.15 2.66 - - - 1.37 0.76 0.51 -0.38 -0.62 - 0.85 -1.45 1.74 - - - - 0.02 - - -
- - - - - - - - 1.8 - - 2.08 - 2.93 - 2.46 0.73 - - -0.85 - - -
- -1.07 - - - -1.23 0.78 - -0.08 0.03 -1.33 1.65 1.23 1.18 2.91 -2.01 - -0.83 -1.82 0.71 - - -
- 0.41 0.02 - -1.45 -1.37 0.73 0.12 -1.13 1.77 1.25 0.34 -0.01 0.17 0.8 -1.47 -0.88 0.16 0.22 -0.09 0.75 - -
- -0.86 2.02 -0.32 -0.19 -1.32 0.74 0.65 0.99 -4.19 0.52 -1.38 -0.12 -1.27 0.26 0.24 -0.19 0.59 0.53 -0.52 -1.16 -0.91 -
- - - - - 2.25 - - - - - - - 3.7 - - - - - 2.4 - - -
- - - - - - - - 3.39 - - - - 2.43 - 2.46 - - - 0.69 - - -
- - - - - - - - - - 1.77 1.71 1.42 2.74 - 2.67 - - - -0.78 - - -
- - - - 1.12 - - - - 1.85 - - 0.65 2.88 0.64 - - 0.05 0.83 1.97 - - -
- - 1.95 -1.23 0.05 0.61 - - - 0.09 1.26 2.09 0.66 1.51 -0.37 -2.13 -1.27 -0.52 -0.77 0.37 - - -
- 2.37 - - - - - - - - - - - 1.55 - 3.38 1.23 - - 1.11 - - -
- - - - - - - - - - - - - - - - - - - - - - -
- - - 0.31 1.2 - 1.38 - - 1.88 - 1.59 -0.14 0.57 0.75 0.19 -1.53 -1.78 0.77 -0.86 1.05 - -
- - - - - - 2.12 - - 1.54 - 2.45 1.6 -0.64 -0.51 0.33 - - 1.52 0.83 - - -
- 0.95 1.24 0.38 0.22 0.89 - -0.24 0.31 -0.57 -0.5 -0.02 -0.18 0.78 -0.94 -1.08 -0.24 -2.78 -0.37 0.5 -0.96 -0.1 0.77
- -0.89 2.65 -0.94 -0.54 -2.02 - 0.42 -1.82 -0.13 0.22 -2.13 -1.58 1.0 1.0 0.58 -0.89 -0.83 0.83 -0.37 - - 0.43
- - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - 4.52 - - -
- - - - - - - - 3.75 - - 1.47 - 2.4 - - - - - 0.58 - - -
- - - 1.16 - - - - - 3.01 - - - - 0.45 - - - - -1.36 - - 3.45
- - - - - - - - - - - - - - - - - - - - - - -
- - 2.51 - - - 3.22 - - 1.64 0.11 1.64 - - - - - - - -0.65 - - -
- - - - - - - - - - - - - - - - - - - 4.52 - - -
-0.27 0.78 -2.42 0.85 0.48 -0.06 -0.38 -1.0 0.28 1.29 0.51 0.11 0.6 0.07 -0.52 0.1 0.01 -0.65 0.03 -0.28 -0.7 -2.17 -
- 0.95 2.4 0.05 -0.11 - - 1.5 - - 0.12 - 0.58 -0.5 -0.52 - -0.83 - 1.21 -0.8 1.84 - -
- 3.49 - 1.94 - - - - - - - - 1.42 2.38 - - - - - - - - -
- - - 3.76 - - - - - - - - - - - 2.89 - - - 1.01 - - -
1.74 - - - 1.37 - - 1.36 - 2.31 1.15 - -0.61 -0.79 - -0.79 2.38 - - -1.57 - - -
1.88 1.99 - - - 0.28 - - - 2.35 0.3 0.13 - 0.47 0.68 -0.47 1.36 - - -1.24 - - -
- -0.39 - -1.28 - - 0.78 - -1.14 0.73 - 1.25 2.13 0.03 -0.85 -0.42 0.66 -1.35 - 1.15 - 1.31 1.17
- - 1.79 -0.39 - - 2.51 - -0.41 0.93 0.63 - -0.95 1.64 -0.13 0.31 -1.43 - -0.01 -0.74 0.18 - -
- - - 1.08 1.8 - - - - - - 2.5 1.4 0.16 - - - -0.24 2.83 - - - -
- 0.09 1.53 0.35 0.67 1.11 - 0.63 0.39 -0.5 1.29 1.75 - -0.54 0.22 -0.53 -1.69 -0.97 - -1.61 -0.08 - -
- 2.06 - 0.54 - - - - 0.74 - 2.15 1.01 0.02 0.91 -0.01 0.81 - -0.56 - 1.56 - - -
- - - - 0.88 - 3.01 - - - 0.9 0.85 2.73 0.19 - - - -0.12 - -0.53 - - -
- - - - - 0.6 1.68 - -0.18 0.26 0.01 2.21 1.45 1.32 1.06 - - - -0.75 0.47 0.35 - -
0.11 - 1.63 -1.73 -0.83 -0.7 0.34 - 0.05 1.95 -1.65 - 0.34 -0.06 0.72 0.72 0.59 -2.88 -2.26 0.55 1.02 - -
-0.34 -0.55 0.2 -0.19 -0.31 -0.23 -0.05 -0.39 -0.07 1.18 -0.63 0.46 0.02 0.69 0.15 -0.19 -0.65 -0.91 -0.92 0.13 -0.13 0.38 0.32
- -1.27 1.83 0.32 -0.28 -1.51 -0.45 -1.07 -0.75 1.97 -1.5 -2.04 -1.45 2.01 0.09 -0.91 -1.05 -0.6 -1.89 0.44 -0.78 - -0.06
0.16 -0.49 1.09 -0.35 -1.67 -2.59 2.07 0.46 -3.43 -2.09 0.14 0.25 0.36 0.8 -0.81 -1.97 -1.63 -0.86 -0.5 0.54 0.33 -0.98 -0.12
- - 2.82 0.47 - 0.4 - - - 1.96 - 1.06 0.92 0.92 -0.09 1.33 - - - - - - -
-0.86 1.05 -2.51 -0.6 -1.99 -0.14 -2.2 -1.6 1.35 1.59 0.67 0.26 0.6 -0.43 0.31 -1.01 -1.55 -1.03 -1.4 -0.16 1.25 -0.68 -1.4
- - - - - - - - - 3.92 - - - 2.58 - - - - - 0.88 - - -
- - - 2.15 - - - - - - 1.46 0.97 2.17 2.06 1.5 - - - - 1.24 - - -
0.39 -1.43 0.94 -1.24 0.07 0.91 0.66 - -1.2 - -0.39 0.08 0.06 1.18 1.21 -0.54 -0.67 -0.47 -0.86 0.36 -0.67 - 1.06
- - - - - - - - - - - - 2.13 3.55 - - - - - 0.74 2.4 - -
- - - 2.1 - - - - 1.16 - - 0.91 - 1.98 1.46 - 2.14 -0.14 - 1.36 - - -
0.0 -0.31 0.52 0.63 0.4 0.18 0.24 1.21 0.69 1.01 -0.05 -0.93 0.53 -0.06 0.2 -0.55 0.32 -0.34 - -0.2 - - -
0.2 0.56 0.29 -0.19 0.16 -0.13 0.18 -0.46 -1.37 0.36 -0.14 -0.2 -0.25 0.83 0.02 -0.23 -0.12 -0.53 -0.44 0.38 -0.07 -0.15 -0.11
- - 3.77 - - - - - - - - - 0.87 - - 0.73 - 0.27 2.06 -1.08 - - -
- 1.77 - - - - - - 1.65 1.81 - 1.4 0.95 0.95 - 0.78 - - - - 2.24 - -
- - 1.46 - -0.0 0.71 - 0.56 - 1.89 -0.81 0.7 -1.28 -1.64 -1.43 -1.58 -1.76 - - -0.46 0.85 - 2.58
- - 2.34 - 1.68 -0.02 2.06 - - 0.89 - 0.58 -1.4 -0.14 - -0.72 -1.88 -1.1 - -0.84 - 1.59 -
- 0.35 - 0.81 - -0.19 - 1.26 -0.04 2.04 - 0.4 0.42 0.09 - -0.89 -1.06 -0.28 -0.73 -0.73 - - 2.27
- - - - - -1.48 2.17 -0.04 -1.28 -0.84 0.25 1.43 1.67 -1.11 -0.45 -2.18 - 1.57 1.88 0.07 - - -
- - - - - - - - - - - - - - - - - - - - - - -
- -1.26 0.87 -1.31 - - 2.18 0.97 0.69 1.37 -1.08 -1.58 1.79 1.05 1.43 - -2.31 - - -1.09 - - -
- 1.59 - 0.32 - - - - - - - 0.21 - -0.24 - 0.59 2.04 0.16 - -1.12 1.05 2.9 -
- 1.31 - - 1.96 2.06 - - - - - - 2.08 1.94 0.47 - - 0.96 - 0.08 - - -
- - - 1.23 0.99 - - 2.51 - - 1.45 - 0.66 - 2.08 - 1.18 -0.01 - 0.23 - - -
-0.09 -0.16 1.09 -0.31 -0.15 -0.3 -0.08 -1.7 -0.03 0.35 -0.93 -1.08 -0.06 1.11 0.15 0.13 0.16 -1.83 -1.56 0.2 0.46 0.36 0.18
- - - 1.12 1.96 2.05 - - - - - 0.93 - 1.93 -0.54 - 1.5 -1.13 - 1.64 - - -
- - 3.88 - - - - - - - - 2.12 1.98 - - - - - - - - - -
1.97 - - - - 0.22 - - - - 0.57 - -0.22 3.0 0.61 0.45 - 1.09 0.81 -0.3 - - -
- - - - - - - - 2.07 3.81 - - - 1.16 - - - - - 1.33 - - -
- - - - 0.36 0.52 - - - 2.92 1.91 - 0.01 1.49 - - - - 0.98 1.65 - - -
0.11 -1.47 2.99 - -0.22 -0.08 0.38 - - -1.04 - -1.78 -2.2 0.22 2.22 -1.39 -1.56 -0.18 - 0.08 0.06 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.