Heatmap: Cluster_61 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
HJ48,hypha
HJ48,hypha,anaero/96h
HJ48,hypha,glu,anaero/96h
HJ48,hypha,xyl,anaero/96h
KO,mycelia,cellu
KO,mycelia,glu
KO,mycelia,gly
KO,mycelia,sopho
KO,mycelia,sugarcane
M124,16h
M124,24h
M124,40h
M124,64h
M307,16h
M307,24h
M307,40h
M307,64h
M362,16h
M362,24h
M362,40h
M362,64h
M7,16h
M7,24h
M7,40h
M7,64h
M727,16h
M727,24h
M727,40h
M727,64h
M76,16h
M76,24h
M76,40h
M76,64h
QM6a,WT,glu,0h
QM6a,WT,lac,24h
QM6a,WT,lac,48h
QM6a,WT,mycelia,cellu,dark
QM6a,WT,mycelia,cellu,light
QM6a,WT,mycelia,dark
QM6a,WT,mycelia,light
QM6a,mycelia
QM6a,mycelia,glu
QM6a,mycelia,gly
QM6a,mycelia,sugarcane
QM9414,WT,2h
QM9414,mycelia
QM9414,xyr1/ara1 KO,2h
QM9978,cellulase-,glu,0h
QM9978,cellulase-,lac,48h
Rut-C30
Rut-C30,24h
Rut-C30,SEB
Rut-C30,SEB,24h
Rut-C30,mycelia
Tu-6
Tu-6,glu
Tu-6,kap8 KO,gly,0h
Tu-6,kap8 KO,sopho,3h
Tu-6,mycelia,sugarcane
Tu-6,sugarcane
WT,mycelia,cellu
WT,mycelia,glu
WT,mycelia,sopho
ace3 KO,mycelia
ara1 KO
azf1 KO,glu
azf1 KO,mycelia,sugarcane
azf1 KO,sugarcane
cre1 KO
cre1 KO,mycelia
gpr8 KO,mycelia,cellu,dark
gpr8 KO,mycelia,cellu,light
kap8 KO,gly,0h
kap8 KO,sopho,3h
xki1 KO
xyr1 KO
ypr2 KO,mycelia,dark
ypr2 KO,mycelia,light
- - - - - 0.64 1.1 - - 4.12 - - - - - - - - - - - 1.35 - - - 1.42 - - - 2.47 1.05 - - - - 0.76 -1.06 -1.34 - - -2.81 1.1 1.01 1.75 - 0.37 0.06 - 1.81 - - -0.71 - - - 1.23 0.49 2.53 - - 0.68 - - - -0.01 0.5 - 0.67 1.11 0.12 - -0.41 1.82 0.68 0.71 0.59 - -
- -3.62 -7.03 -3.23 -2.69 2.32 -2.77 -3.27 -1.61 -2.25 -3.54 -4.37 - -1.28 -1.24 -2.37 -3.89 -4.16 -3.63 - - -1.9 -3.48 -3.8 - -5.49 -2.46 -2.6 - -2.28 -2.92 -5.37 - -1.14 -1.82 -1.31 -1.34 -1.68 0.5 -1.81 -0.68 -3.79 -2.18 -2.04 -2.09 -1.28 -1.35 -1.58 -1.01 -3.2 -3.45 -2.41 -2.89 -2.82 -1.72 -0.26 -2.38 0.42 1.77 1.41 1.3 4.34 -1.58 -2.84 0.14 -0.73 1.27 1.47 -1.16 4.19 0.01 -2.13 -0.19 -0.32 -0.78 -1.5 -1.62 -1.43
- - - - - - 2.88 - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.71 - - - - 4.16 - - - - - - - - - - - - - - - - - - - - - - - - 0.66 - - - 0.9 4.09 - - - - 2.6 - - -
- 3.28 - - - 0.69 - 0.51 0.75 1.89 - - - - - - - - - - - - 2.09 - - - - - - - 3.56 - - - - 2.4 -0.48 - - - -1.65 1.73 - - - -0.66 0.77 3.63 2.39 - - -0.12 - - - - - 0.31 - 0.18 - - 1.43 - -0.33 - 1.76 - -1.46 - -0.64 - - - 0.52 0.69 - -
- - - -3.99 -2.26 0.42 -0.39 -2.59 -1.76 -0.63 - - -0.75 - - - - - - - -0.92 - -2.44 - - - - - - -1.45 -2.44 - -0.82 0.51 0.7 -2.15 -0.53 0.02 -1.52 - 1.07 -1.5 -1.6 - - -1.78 -1.51 -0.14 -1.13 -3.83 5.47 -0.19 -1.06 - -1.56 -4.1 - - - - -0.91 -0.34 -2.1 0.01 -1.64 -3.04 -2.36 -2.28 -1.71 2.85 -0.87 1.32 -1.15 -0.19 -1.65 -1.74 - -
-4.78 0.19 -5.1 -4.16 -0.65 -2.45 -1.32 -0.71 -1.32 0.7 0.64 -0.61 -1.7 -1.27 -0.64 -0.41 -2.1 1.69 1.74 1.37 0.57 -0.98 -0.28 -0.79 -2.19 -0.74 -1.0 -0.06 -2.42 -0.13 2.38 2.2 -0.53 -2.89 -2.96 -3.05 0.87 0.31 1.75 1.07 -0.9 -2.56 -1.5 -1.34 -0.49 -0.66 1.38 -0.37 -1.31 -2.71 -3.61 -2.04 -1.94 -0.5 -1.97 -1.47 1.55 1.5 -1.22 -1.31 -1.0 -1.57 0.39 0.06 -0.29 -0.66 -0.88 -1.04 -0.55 -0.37 1.66 0.16 -0.39 -0.1 -0.19 -0.61 0.09 1.05
- 0.97 - -2.62 -2.47 0.5 -0.2 -2.12 0.3 0.33 -1.16 -0.34 -0.55 0.47 -0.44 -0.08 -0.52 -0.9 0.57 1.5 1.88 1.04 0.87 -0.4 -0.31 -0.01 -0.68 -0.13 0.77 1.43 2.1 1.72 1.52 0.75 0.93 0.53 -1.22 -3.11 -0.58 -1.4 -1.65 0.17 0.01 -0.08 0.29 -0.04 0.8 2.16 0.65 -2.06 -1.59 -1.07 -1.7 -0.56 -4.21 -1.35 -1.75 -1.22 -1.42 -1.13 -1.56 -1.02 -2.18 -1.74 0.26 -0.9 -1.53 -1.67 -0.08 -1.75 -1.1 -2.7 -1.62 -0.64 0.2 0.12 -1.22 -1.32
- -2.39 - -2.19 -2.16 0.22 -0.68 -2.56 -0.81 -2.75 -4.06 - - -2.37 -1.64 -2.99 - -6.46 -4.84 -5.86 -4.56 -2.05 -2.37 -3.49 -3.0 -5.73 -2.83 -1.77 -3.98 -1.01 -0.82 -3.62 -2.99 0.5 0.52 1.38 -1.46 -1.75 -2.2 -2.81 0.38 0.02 -0.6 -0.33 -0.18 -1.84 0.56 0.64 0.15 -3.61 5.38 -0.43 -0.86 -4.46 -1.33 -0.34 -3.89 -2.21 -2.88 -2.61 -1.93 -0.02 -2.04 -1.27 -1.09 -0.25 -3.04 -2.63 -1.71 0.71 -1.72 -1.71 1.11 -0.46 -0.78 -1.08 -0.26 -2.72
- -2.43 -4.25 -2.13 - -1.85 0.32 -2.16 -4.69 3.29 1.45 -1.59 - - - - - 3.27 1.92 0.12 -1.15 -2.72 1.13 -0.34 - - - - - -1.14 -0.33 -1.68 -1.0 1.48 -0.06 -2.37 -5.2 - -0.45 -2.8 2.01 -2.98 -0.02 - - -3.23 - -2.1 - - 4.41 - -2.85 - -0.72 -2.43 - -3.41 -1.23 -1.55 -2.4 - -2.33 -1.76 -4.24 -1.31 -4.56 - -3.73 -2.99 -1.5 - 1.78 1.87 -3.15 -6.89 -1.36 -3.8
- -1.6 -7.0 -4.47 -2.26 -2.87 -3.55 -1.44 -3.49 0.21 0.64 -2.58 -3.53 -1.91 0.4 -0.62 -5.63 - - - - - - -6.9 - 2.08 1.98 1.03 -0.28 2.8 3.64 3.57 3.65 -2.01 -1.46 -0.99 -1.47 -2.31 -1.12 -2.22 -1.44 -3.62 -3.44 -2.15 -0.09 -0.82 0.51 0.04 -1.1 -3.2 -3.0 -2.03 -1.95 -2.57 -2.06 -2.88 -0.62 0.03 -2.56 -2.76 -2.17 -2.61 -0.66 -4.59 -0.83 -2.99 -3.47 -3.71 -1.54 -1.86 -1.4 -2.83 -1.51 -0.62 -0.38 -1.07 -1.77 -2.43
- 1.36 - -1.56 -0.27 -0.19 -1.13 -3.43 0.17 - - - -0.31 -1.59 -2.54 -2.24 - - - - - - -2.17 - -0.54 - - -2.27 - - - - - -1.71 0.32 -1.69 0.32 -0.63 -1.41 -2.16 -2.14 -1.37 -1.9 -1.24 - 0.57 -1.41 0.33 - -3.32 4.29 2.72 2.45 - - -2.63 -2.43 - -0.6 -1.93 -1.79 -0.89 -2.67 -3.95 1.02 -0.7 -0.09 -1.25 -0.23 3.93 -0.59 -0.61 -3.05 -1.31 1.42 -0.24 -0.49 -3.18
- - - -3.02 -0.81 0.08 -2.25 -2.62 -2.32 - - - - - - - - - - - - - - -1.56 - - - - - - - - - -2.27 -2.29 -2.26 -3.09 -2.65 - - -2.41 -0.91 - -1.66 -1.9 -1.53 - 0.03 - -1.87 4.69 3.99 3.54 -2.52 - -2.53 -1.95 -3.27 - - -1.28 -1.41 -2.26 - 0.26 - -1.84 -2.35 -2.44 3.64 -1.91 - -3.59 - 0.46 -4.01 -2.86 -2.69
- -0.2 - - -1.25 0.25 -2.85 - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.17 - -1.97 - -1.79 - -1.46 -0.77 - - - -1.3 - - -0.09 - 4.51 3.99 3.17 - - - - -2.19 - - -1.16 -1.25 - - -0.97 - - - -4.84 4.46 - -2.99 - - -0.5 -4.18 - -
-2.49 1.09 -2.94 -1.24 0.11 0.76 -0.49 0.12 -0.27 -0.37 -0.9 -0.96 -0.11 -0.19 0.54 -0.32 -0.42 0.04 0.62 0.49 0.5 -0.47 0.29 -0.38 -0.89 0.16 -0.15 -0.74 -1.38 -0.02 1.33 0.79 0.32 -0.83 -0.81 -1.36 -0.65 -0.28 0.02 -0.62 -0.28 1.5 -0.18 -0.82 0.04 -0.61 -0.36 0.4 -0.35 -2.58 0.77 0.98 1.19 -0.67 -0.23 -0.67 0.16 1.29 0.66 0.35 -0.13 -0.06 0.04 -0.76 -0.08 -0.35 0.28 0.16 -0.47 -0.3 -0.39 -0.26 -0.1 0.63 -0.21 -0.7 -0.44 -0.61
- 2.2 - - 2.76 -0.22 0.63 - - - 2.0 - - - - 1.77 - - - - - - - - - - - - - - - - 3.67 - 1.23 - 0.39 - - - 0.9 - - 1.77 2.62 -0.51 2.19 - - - 0.81 - - - - 0.34 - 0.25 - 0.1 2.18 - 1.34 - 0.05 -0.54 0.08 - -0.59 - -0.68 - 2.02 - 0.92 0.39 - -
- -1.85 -6.48 -2.23 -0.28 1.55 -2.44 -2.68 0.26 -3.8 -4.86 -2.32 -1.1 -4.04 -3.7 -1.22 -1.93 -3.6 -4.43 -1.23 0.88 -2.54 -3.26 -3.92 -0.55 -2.54 - -2.21 -0.5 -3.28 -4.85 -0.92 -1.27 -1.85 -1.04 -1.4 -5.17 -4.03 -5.25 -4.42 -2.31 1.5 -1.94 0.69 -5.24 -0.52 -0.56 -3.75 -4.54 4.32 4.8 -0.27 -5.02 -5.85 -1.92 -1.8 -5.28 -4.63 -2.97 -4.19 -2.31 -0.62 -5.51 -5.8 -0.39 -1.95 -0.49 -0.73 -0.35 -1.83 -3.29 -4.67 -0.32 -2.56 -0.48 0.44 -1.83 -5.07
- - 1.81 - - 0.88 - - - - - - - 3.2 - - - - - 3.62 - - - - - - - - - - - 3.28 - - - - - - 2.04 2.28 0.38 - 2.96 - - -0.32 - - - - - - - - - - - - - - - - - 1.5 - 0.85 - - 0.86 3.13 0.71 - - 1.69 -1.15 1.04 - -
- -0.01 - - 0.65 - -4.53 -1.25 -1.31 - - - - - - - - - - - - - - - - - - - - - - - -5.04 -6.42 -4.29 -4.35 -0.38 -6.04 3.31 -6.82 -0.91 -7.1 -3.14 -1.39 - 0.61 -3.52 - -4.36 -3.54 4.58 2.48 1.8 -1.76 - -5.29 -2.4 -5.84 -2.59 -2.89 -2.38 -2.55 -0.41 3.33 -0.96 -3.23 -0.98 -0.52 0.77 -2.73 1.67 -6.74 -1.98 2.39 0.19 0.32 0.13 -5.88
-6.77 1.03 -8.36 -3.23 -0.23 0.55 -1.86 -1.65 -1.79 -0.36 -0.1 -1.06 -3.43 -1.46 0.13 -0.27 -2.41 -1.73 -0.73 -1.37 -2.08 -1.61 -0.75 -0.65 -2.38 -0.54 -0.66 -0.08 -1.82 -1.27 -0.01 -0.34 -1.36 -1.87 -1.54 -1.72 -0.13 -3.41 1.22 -2.42 0.99 -0.5 -2.48 -2.44 -1.52 -1.39 2.36 -1.01 -2.65 -3.57 2.29 -1.24 -2.23 -3.01 -1.43 -2.9 -0.87 0.58 -1.13 -0.91 -0.19 1.5 0.24 3.19 -1.04 -2.08 -0.5 -0.61 -1.59 3.45 0.33 -3.23 1.91 -1.44 -1.7 -2.27 1.39 -2.6
- - 0.0 0.15 0.81 0.47 1.28 2.4 1.81 - - - - - - - - 1.41 - - - 1.83 - - - - - 1.69 - - 2.25 - 3.36 - - - - - - - -2.64 - 0.23 0.37 1.31 1.54 2.32 - - - - - - 0.7 - 0.69 - - - - 2.92 - 1.03 - 1.33 - -0.18 - 0.05 0.35 - - - - 1.37 1.56 - -
- 1.76 - - - 1.15 - -1.01 -1.65 - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.05 - -0.83 - -1.52 - - - 1.18 -1.41 2.38 1.13 - - - - - -0.44 - 0.94 - 1.79 - - 2.11 1.67 - -0.39 -0.62 1.88 -1.36 - -2.02 4.9 -0.51 - 2.45 0.69 -1.16 -1.25 1.26 -
-5.05 -1.25 -6.64 -4.1 0.44 -4.18 -1.36 2.03 -1.6 -1.55 -1.94 -0.57 0.17 -0.42 0.01 0.01 -0.71 -2.96 -1.47 -1.43 -0.54 -0.68 2.8 -1.06 -1.66 -1.78 -1.92 -1.25 -2.1 0.37 2.38 -1.43 -2.08 0.78 0.58 0.15 -1.49 -6.4 0.97 -5.31 -4.18 -6.49 -1.27 -1.19 -0.89 0.39 -0.21 -2.81 -4.84 -2.92 - -7.39 - -6.15 -1.06 -1.7 -5.56 -4.93 1.65 1.53 1.31 -0.87 0.97 -4.78 0.9 -1.17 1.68 1.98 0.81 3.09 0.03 -6.74 -5.62 -1.73 0.93 0.46 -1.24 -
-1.23 0.78 -1.44 -0.52 -0.7 -0.07 0.06 -0.64 0.05 0.04 -0.1 -0.27 0.36 0.04 0.45 0.01 -0.15 -1.07 -0.2 -0.19 0.71 0.11 0.25 -0.45 0.87 -0.11 -0.44 -0.12 0.27 0.04 0.3 -0.08 0.56 0.82 0.9 0.53 0.02 0.27 0.1 0.71 -0.91 -0.04 -0.2 -0.34 -0.28 -0.02 -0.46 1.6 0.7 -1.18 -0.39 -0.21 -0.45 -1.09 -1.01 -0.61 -1.4 -0.4 -0.42 -0.38 -0.5 0.37 -0.62 -2.3 0.01 -0.37 -0.29 -0.22 -0.12 -0.83 0.2 -0.11 0.42 0.41 0.12 0.16 0.3 0.64
-3.45 1.05 -3.83 -1.63 0.68 -2.53 -0.59 1.32 -0.78 0.62 -0.42 -1.51 -0.73 0.86 0.32 0.21 -0.3 -1.12 -1.02 -0.92 0.39 0.94 0.54 -0.87 -3.03 -1.28 -2.41 -1.23 -1.49 1.47 0.94 -0.45 1.48 -1.9 -1.48 -1.09 -1.82 1.78 -1.04 2.45 -2.4 -2.33 -0.81 -1.3 1.18 -1.57 -0.25 -3.39 -4.23 -1.06 -0.29 0.3 -0.12 -1.45 -1.31 -1.07 -2.75 -1.23 -0.07 -0.27 0.12 -0.72 -0.59 -1.91 -1.21 -0.19 -0.01 0.24 -1.11 2.12 -1.37 1.47 -0.78 0.33 -1.08 -1.24 0.51 2.07
0.13 -2.89 0.06 -1.8 1.74 0.94 -0.91 1.94 -0.55 -4.03 -3.93 -2.03 -5.44 -3.67 -3.73 -3.91 -4.9 -3.87 -3.07 -3.47 -5.15 -3.45 -3.26 -3.24 -3.95 -4.31 -3.86 0.07 -4.86 -3.69 -2.97 -3.76 -4.82 0.04 -0.3 0.07 -0.22 1.31 -1.03 -1.69 -0.07 -0.3 -1.84 -0.51 1.36 -0.39 1.55 0.45 -0.91 1.13 -0.4 -0.32 0.48 -0.38 1.77 -2.68 -1.01 -1.6 -2.43 1.78 1.75 2.0 1.39 0.8 -1.15 -1.7 -1.83 -3.08 -1.15 3.39 -0.25 1.54 -1.63 0.12 -1.2 -1.79 -1.25 -1.69
-7.7 -7.52 -8.11 -5.55 0.83 -6.29 -1.52 -0.03 -1.59 0.92 -0.07 1.99 0.39 0.28 1.69 2.1 1.99 -0.29 1.13 1.15 -0.7 0.13 2.37 2.24 1.16 -0.22 -0.85 1.66 1.54 0.83 2.77 1.46 1.53 -2.98 -2.72 -2.42 -2.69 -2.22 -1.78 -2.96 -3.01 -6.14 -2.09 -0.91 -4.64 -1.28 -1.49 -4.83 -5.27 -3.9 -2.0 -1.81 -1.78 -2.83 -1.11 -3.39 -5.79 -2.69 -1.41 -1.58 0.35 -2.38 -0.22 -5.73 -1.4 -3.76 -0.63 -0.77 -1.49 0.33 -1.38 -2.46 -3.4 -2.34 -1.63 -2.17 -2.09 -2.88
3.28 -1.44 3.31 1.41 2.45 0.72 -1.79 2.29 -1.0 -3.66 -3.58 -1.32 -6.03 -3.62 -3.48 -3.39 -4.55 -3.43 -2.75 -3.54 -4.87 -3.23 -2.9 -2.92 -3.95 -4.1 -3.13 2.02 -5.3 -3.64 -2.4 -3.45 -4.0 -5.05 -4.41 -4.25 - - - - 1.22 -1.16 -3.03 -1.34 0.08 0.57 0.16 -3.95 -6.33 -0.96 - - - 0.23 - -2.38 -6.61 -6.95 -2.33 2.4 1.74 1.5 1.59 -1.07 -0.21 -1.02 -1.1 -2.16 -0.4 2.96 - - -7.32 -5.44 -0.22 -1.08 - -
3.36 1.46 3.24 - - 1.25 -0.14 - 0.21 - 2.24 1.08 - - 3.01 1.02 - 1.89 0.15 - - - 1.26 1.18 - 1.47 - - - 2.32 - - - - - - - - - 0.09 0.53 - - 1.12 - 1.11 - - - -0.13 - - - - - - - - 0.34 - - 0.37 - 0.89 -0.5 - - - -0.07 - - - - - 0.77 0.53 - -
1.22 -0.64 1.38 -0.78 0.67 -1.23 -0.8 0.38 -0.84 -1.06 -1.25 -0.79 -2.05 -1.1 -0.57 -0.28 -1.27 -0.66 0.76 0.65 0.65 -1.3 -0.36 -1.06 -1.69 -1.69 -1.68 -0.55 -1.23 -0.23 1.67 0.9 0.56 -1.25 -0.66 -0.99 0.72 -1.13 1.84 -0.82 -0.7 -1.2 -0.7 -0.48 -1.02 -0.8 0.8 1.15 1.25 -1.28 -0.54 -0.1 0.05 -2.16 -0.75 -0.02 -0.3 1.51 -0.35 -0.44 -0.34 -0.02 1.46 -0.56 -0.05 0.82 -0.59 -0.42 -0.53 -0.11 1.23 -0.86 -0.02 -0.26 -0.16 -1.01 0.09 -0.07
- - -4.28 - - -1.53 -5.05 - -5.04 - -1.68 - - - -1.9 -1.78 -1.21 - - - - -2.75 - -2.7 - - - -2.92 -0.62 -2.66 - -1.16 -2.03 1.12 0.93 -1.36 -5.22 - - - 2.54 -3.03 -1.54 - - -2.86 - - - - 5.84 -4.85 -1.04 - - -5.25 - - - - - -1.96 - -4.6 -3.9 -5.24 - - -4.25 0.59 -3.28 - 1.31 -3.41 -3.06 -4.19 -0.48 -
- - 3.14 - 2.79 - - - -0.06 - 1.71 - - - - - - - 1.8 - - - - - - - 3.06 - - 2.11 - 3.6 3.65 - - - - - - - 1.15 - - - - -0.67 - - - 0.67 - - - - - - - - 2.07 1.07 - - - 0.06 -1.51 - - 1.15 -1.68 - - - - 0.02 0.09 -1.11 - -
0.8 -5.84 1.02 -0.15 -6.84 -7.95 -8.41 -1.59 -6.21 -0.82 -0.73 0.2 -0.08 -4.53 1.92 0.72 1.93 -1.02 -0.15 0.3 0.36 -3.76 3.58 2.0 1.68 -2.2 -1.3 0.14 0.84 0.36 3.86 2.07 1.36 -6.13 -6.92 -7.34 -5.63 -11.46 -8.03 - -8.05 -7.67 -5.15 -5.37 - -8.59 -7.44 - - - -8.82 -8.87 - -9.63 -5.71 -11.29 -9.65 -7.81 -9.55 -7.97 -5.02 -5.35 -4.55 -8.0 -6.34 - - -9.46 -6.37 3.44 -5.89 -11.56 - -8.91 -7.32 -9.74 -7.32 -8.84
1.76 - 2.07 1.11 - - -0.82 0.23 - - - 1.99 - - - - 3.18 - 1.48 - - - - 1.62 - - - 1.65 - - - - 4.06 - 1.04 2.98 -0.91 -1.02 0.26 - 0.43 - 0.18 - - -1.44 - - - - - 0.44 - - - - - - - - - - - - 0.14 -0.99 -0.22 - -0.62 - 1.0 -1.27 - -0.09 -0.76 -1.83 0.33 1.49
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.