Heatmap: Cluster_1 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
10DPI,PST,Avocet,leaf
11DPI,PST-87/66,Vuka,Yr5-,leaf
9DPI,PST-87/66,Vuka,Yr5-,leaf
germinating,PST-87/66,in vitro
germinating,PST104E,leaf
n+n,PST,wheat,spore
n+n,PSTS7,Holeby,leaf
n+n,spore
Haustoria,Haustoria
Haustoria,PST104E,leaf
PST104E,wheat,leaf,monoisolate
PST,Ambition,leaf
PST,Oakley,leaf
PST,Solstice,leaf
PST,Torch,leaf
PST,Triticale,leaf
PST,Vuka,leaf
PST,leaf
PST,wheat,leaf
Avocet,leaf
- - - - - - - - - - - - - - - - - 2.44 3.86 -
- - - - - - - - - - - - - - - - - 4.32 - -
-0.41 -0.13 -0.16 -0.13 -0.37 -0.1 0.09 0.35 -0.61 -1.94 -0.64 0.22 0.64 1.06 0.01 -0.2 0.14 0.16 -0.01 0.05
- - - - - - - - - - - - - - - - - 3.4 3.23 -
0.6 -3.2 - - -2.26 0.84 2.75 -1.36 -1.75 -0.63 -1.35 -2.46 -2.33 -0.54 -0.25 0.1 -0.59 0.25 1.63 -
- 2.25 1.61 - - - - - - - -2.98 1.3 0.2 - - -0.22 2.19 0.99 0.02 -
- - -0.6 - - - -1.96 - 3.51 2.04 -0.46 - -3.24 -0.49 -0.97 - -2.55 -0.43 -0.72 -
2.22 -4.77 - -2.7 -3.52 - 2.27 0.02 - - -4.85 0.84 -1.16 -0.79 1.39 -2.49 0.8 -0.03 -0.24 -
- - - - - - - - - - - - - - - - - 3.61 2.97 -
- - - - - - - - - - - - - - - - - 2.25 3.93 -
- - - - - - - - - - - - - - - - - 3.69 2.82 -
- -0.33 -0.0 0.8 0.05 - - - 1.14 - -0.04 0.06 -1.63 1.7 - - 0.06 0.27 -3.67 2.41
- - - - - - - - - - - - - - - - - 4.32 - -
1.54 1.44 1.95 -1.8 -1.7 -3.84 -1.16 - 0.48 -0.01 0.06 -1.39 -2.16 -1.2 -2.5 -0.51 -0.1 -0.98 -1.88 1.22
1.66 -3.33 -3.54 -4.81 -4.23 -0.72 1.81 -1.85 1.47 2.23 0.21 -3.86 -2.61 -2.82 -1.38 -3.26 -2.38 -2.04 1.02 -1.98
- - - - - - - - - - - - - - - - - 3.97 2.12 -
- - - - - - - - - - 3.41 - - - - - - 2.2 2.26 -
- 2.29 - - - - - - - - - - - 1.83 - - - 3.25 0.99 -
- - - - - - -0.47 -1.79 2.17 0.99 -1.0 - 0.62 0.69 1.7 0.01 -0.57 1.58 -0.11 -
- - - - - - - - - - -0.54 3.34 - 1.99 - - 0.44 1.05 0.84 -
- - - - - - - - - - - - 2.26 - - 3.31 1.46 0.81 -0.31 -
- - - - - - - 2.35 2.79 - 0.43 - - 1.15 - - - 0.97 1.28 -
4.14 -8.54 - -10.45 - -8.8 - -4.67 -6.07 -3.67 -4.47 -6.75 -3.6 -1.77 -8.99 -3.96 -6.86 -0.15 -0.33 -
- - - - 3.25 - - - - - 2.14 - - - - - - 2.18 0.64 -
- - - - - - - - - - - - - - - 4.27 - - -0.61 -
-0.68 0.17 -0.28 1.31 0.83 0.31 -0.17 0.19 -0.3 -3.94 0.18 -0.79 -0.38 -0.04 -0.31 -0.74 -0.08 -0.0 0.17 0.15
0.26 1.09 0.84 -0.32 -0.16 -1.34 -2.85 0.11 -0.82 -1.07 0.49 -1.21 0.13 0.12 0.22 -0.45 0.08 -0.49 -1.27 1.28
-0.03 -3.52 -2.36 1.05 0.83 0.41 -1.16 0.25 2.17 0.57 -0.2 -0.98 -0.44 -0.03 -1.29 -2.09 -1.01 -0.51 -0.23 -3.02
1.11 -8.27 -4.1 - - -1.29 2.48 -3.22 -1.36 -3.84 -5.94 1.01 -2.17 -0.25 1.91 -0.08 -0.05 -0.18 0.67 -
- - - - - - - 3.38 - - -1.05 - 1.23 - - - - 2.17 1.16 -
- 1.38 - -1.17 - - -1.87 - - - -1.43 - - 1.0 - - -1.14 1.24 -5.16 3.52
- 0.2 - - - - 0.59 - 2.74 - 0.16 - -19.93 - 0.55 1.38 -20.15 2.13 0.14 -
- - - - - - - - - - - - - - - - - 4.32 - -
- 0.37 - - - - 0.91 - 1.52 - -1.23 1.98 - 1.77 - 0.88 -1.17 1.16 0.72 -
- - - - - - -1.14 - 2.14 - - - - 1.14 -0.04 - -0.02 0.98 -0.88 3.08
- - - - - - - - - - - - - - - - - 4.08 1.6 -
-0.9 -1.85 - - - -2.25 -4.16 -2.28 2.25 1.25 -0.6 -0.88 0.22 1.44 -0.64 -0.01 -1.55 0.44 -1.07 1.43
-1.74 -2.07 -2.48 - -6.15 - -1.12 - 3.13 0.8 -1.09 - -0.08 0.73 0.31 -0.51 -2.09 -0.36 -1.63 0.97
- - - 2.7 - - - - - - - - - 3.12 - - - 1.95 -0.05 -
0.04 -2.36 -1.71 - - -3.89 2.8 -3.92 1.43 1.05 -0.75 -2.02 -0.21 0.89 -2.79 -2.83 -2.05 0.19 0.45 -
- -0.53 -0.34 -0.2 -0.95 -1.52 -0.48 -1.85 2.17 1.99 0.2 -2.79 -0.16 0.46 -0.71 -1.2 -0.62 -0.34 -1.09 -0.35
0.09 0.05 -0.35 -0.54 -0.59 -1.15 -0.66 -1.1 -0.75 0.17 0.09 0.3 0.41 0.47 0.58 0.15 0.11 0.25 0.39 0.38
- - - - - - - - - - - - 3.84 - - - 1.2 -0.01 1.24 -
- - - - - - - - - - - - - - - - - 3.34 3.31 -
-0.48 -1.52 - -2.98 -5.18 -3.49 3.2 - 1.4 1.63 -0.21 -2.42 -2.03 -1.31 -1.44 -3.97 -2.18 -1.15 -0.04 -
0.73 -2.55 -1.02 - -6.29 - -1.58 - 0.21 2.43 0.48 -3.92 -2.8 -2.75 -1.25 -3.39 -2.13 1.99 2.0 -1.81
- - - - - - - - - - - - - - - - - 3.73 2.75 -
3.46 -1.75 -2.02 -4.31 -5.23 -4.95 -0.3 -4.12 -1.03 -1.67 -1.91 -0.45 -0.94 -0.51 -0.6 -1.71 -1.41 0.47 0.35 -1.21
0.49 -0.8 -0.74 0.56 0.87 0.08 -1.48 0.34 -0.38 -3.14 0.24 -0.97 0.24 0.12 -0.19 -0.52 -0.17 0.02 0.03 1.08
- - -0.86 - - - -1.68 - 1.7 -0.88 -2.79 -0.17 0.07 1.76 -1.22 0.29 -1.84 2.32 1.57 -
- -28.41 - -5.18 -4.04 - - - 1.56 0.79 -0.05 - 3.48 - 0.95 - -30.87 0.03 -2.84 -22.66
- - - - - - - - 4.03 - - - - 1.13 - - - -0.5 -0.29 -
-0.06 -1.58 -0.07 - - -1.56 1.56 -2.03 1.81 1.9 0.22 -1.02 -2.2 -3.58 -1.24 -1.1 -1.03 -1.63 1.39 -0.52
-0.51 -1.24 -1.68 -3.32 -3.36 - -4.74 - 3.14 -5.28 -3.09 -2.58 1.11 1.55 - 0.28 -0.89 0.38 -3.47 -0.05
0.91 -0.31 -0.33 -1.49 -1.99 -1.55 -0.36 -1.56 -4.27 0.07 -0.11 0.55 0.28 0.84 0.23 -0.39 -0.07 1.25 0.98 -0.49
- - - - - - - - 2.91 - - - - 1.23 0.78 1.2 -1.08 2.42 -1.81 -
- - - - - - - - - - - - - - - - - 3.99 2.03 -
1.58 -1.68 -1.17 - - - 0.5 - 0.07 0.1 -1.08 0.1 0.88 0.8 -0.75 -0.37 -0.55 1.43 1.5 -
2.66 -4.25 -3.68 -8.19 - -7.27 -2.93 -6.89 -4.64 0.9 -0.79 -0.16 -0.19 0.42 -0.58 0.27 -2.78 1.62 1.42 -5.11
- - - - - - 0.7 - 4.02 - - - - - - - - 0.31 -0.11 -
- -3.71 - - - - -3.04 3.91 0.47 - -4.62 0.03 -2.33 -1.65 - -0.72 -3.48 -0.39 -1.34 -
0.28 0.63 0.09 0.46 -0.65 -1.07 -6.97 -1.99 1.37 -1.3 -0.52 -1.53 0.32 1.12 -5.9 -0.03 -0.41 -0.06 -1.39 1.52
- - - - - - -22.66 - 2.32 1.32 -0.49 - -21.73 2.2 - -0.32 -1.98 1.99 1.12 -
- - - - - - -0.6 -1.69 3.38 0.68 -0.96 - -0.87 0.38 -0.26 0.14 -3.67 0.85 -0.29 -
- - - - - - -0.89 - - - -0.03 - 2.64 - - - 1.86 2.47 1.61 -
3.51 -0.99 - - - - - 2.29 - - -0.06 - - - - -23.19 -0.34 0.28 -1.91 -
- -1.53 - - - - - - 2.89 -0.71 -2.03 -0.14 0.64 2.07 - - -1.85 1.84 -0.24 -
- -5.26 - - - - -4.64 - 3.75 -0.3 -2.21 -2.15 -0.76 0.73 - - -3.61 0.62 -1.43 0.02
-0.36 -1.66 -2.7 -1.4 -1.02 -2.07 -3.04 -1.21 1.99 -2.51 -0.79 0.24 0.92 1.02 1.22 0.37 -0.27 0.6 0.23 -2.94
- - - - - - - - 3.16 2.07 0.48 - - -0.9 - - -1.69 1.67 0.52 -
- - - - - - - - - - - - 3.84 - - - 1.2 -0.01 1.24 -
-1.31 0.95 0.27 0.89 0.33 1.05 -6.14 - 1.13 -0.61 0.66 -1.78 0.1 0.95 - -0.06 -0.33 0.04 -1.07 -1.71
- - - - - - - - - - - - - - - - - 3.17 3.46 -
- 2.93 - - - - - - - 0.75 -0.3 - -0.31 2.36 - - -0.77 1.2 0.05 -
- - - - - - - - - - - - - - - - - 2.81 3.7 -
- - - - - - - - - - - - 3.84 - - - 1.2 -0.01 1.24 -
- 0.06 2.24 -0.57 0.56 2.06 - - 1.48 0.22 0.43 - -0.34 -0.42 - - - -0.33 -1.93 -
- - - - - - - - - - - - - - - - - 4.03 1.87 -
- - - - - - - - - - - - - - - - - 4.32 - -
- - - - - - - - - - - - - - - - - 3.99 2.05 -
-2.28 -1.43 -3.03 -2.7 -3.14 -2.63 2.16 -5.25 1.27 2.83 0.83 - -1.23 -0.48 -3.11 -2.72 -1.8 -1.65 -0.3 -1.95
- 0.77 - -1.16 -0.98 0.94 1.36 -1.1 -0.65 -1.06 -0.62 - 0.04 1.47 -1.25 0.06 0.04 1.12 0.31 -0.13
- - - - - - - - - - - - - - - - - 4.32 - -
- - - - - - - - - - - - - - - - 2.71 2.99 2.45 -
- - - - - - - - - - - - - - - - 3.32 2.47 2.16 -
- 0.56 0.26 -0.79 -2.44 - - - -0.51 - -1.73 - 0.82 1.7 - - -0.15 0.53 -3.63 3.02
2.78 -0.75 -1.57 -1.63 -2.29 -2.06 -0.84 -2.02 -3.91 -1.06 -0.95 -0.32 -0.14 0.32 -0.44 -1.12 -0.66 1.23 0.96 -0.99
- -1.03 -0.19 -0.16 -0.7 -0.2 1.22 -3.41 1.57 0.6 -0.06 -0.18 -0.23 0.52 -0.72 -0.83 -0.08 1.09 -0.02 -
1.65 - - - - - - - 2.61 -0.83 -2.37 - -1.43 0.56 -1.47 -0.61 -2.14 0.57 0.56 1.98
- -1.02 - - -0.52 - 3.85 - - -0.86 - - -1.25 - - - -0.1 -0.22 0.7 -
- - - - - - - - - - - - - - - - - 4.32 - -
4.19 - - - - - -13.08 - - - - - - - - - -0.12 -0.75 -1.8 -
- -0.57 - - - - - 3.11 2.79 - -3.06 - -2.16 0.48 - -0.4 - 0.21 -2.57 -26.78
- 1.42 0.73 -1.32 -2.13 -1.74 -1.58 -1.07 1.16 -2.49 -1.03 -0.72 0.49 1.55 -0.58 -2.09 0.75 0.68 -2.05 0.73
- -0.55 - - - - -1.53 - 3.41 -2.42 -3.79 - 0.9 1.11 -3.24 -2.96 -3.44 0.34 -2.71 1.22
- - - - - - - - - - - - - - - - - 3.16 3.47 -
- -0.87 - - - - -0.62 1.11 2.56 0.0 -1.42 - -2.26 0.25 -1.04 0.19 -2.13 2.13 0.82 -
- -0.22 -2.71 -1.76 -1.08 -2.9 -0.72 -3.93 1.32 0.4 -0.94 -0.71 0.74 1.1 0.84 0.33 0.6 1.06 0.45 -0.64
- - - - - - - - - - - - - - - - - 4.32 - -
- - - 0.03 0.18 - -0.3 1.63 - - -0.93 2.54 - - 1.01 0.88 -0.37 1.06 -0.18 -
- - - - - - - - - -0.9 -2.93 - -1.03 2.73 - -0.82 -1.07 3.16 1.14 -
3.88 -6.53 -6.01 -9.65 -11.51 -7.0 -4.02 -5.23 -7.27 -1.92 -2.47 -2.33 -2.93 -2.26 -1.48 -3.25 -3.59 0.67 1.01 -
- 0.92 0.78 0.47 -1.08 - - - -0.29 -2.46 -0.42 -1.21 0.73 1.77 - -5.63 0.35 0.77 -3.99 2.07
-1.97 0.78 -0.02 0.62 -0.19 0.07 0.91 -0.34 -2.81 -1.69 -0.11 -1.31 -0.47 -0.44 0.33 -0.98 0.81 0.04 0.14 1.01
1.09 -1.1 -1.21 -2.87 -3.94 -3.5 -2.02 -4.44 -4.18 0.85 0.39 0.96 0.13 0.4 0.64 -0.74 -0.37 1.18 1.3 0.25
- - - - - - - - - - - - - - - - - - 4.32 -
2.52 -0.28 -0.43 -2.31 -2.7 -1.89 -0.92 -2.51 -2.27 -0.36 -0.06 -0.03 0.07 0.32 0.22 -0.79 -0.07 -0.04 0.19 0.41
-1.21 -0.33 0.27 -5.84 - -0.75 1.68 -2.17 1.46 2.27 0.61 -3.27 -2.74 -1.12 -2.0 -1.09 -0.56 0.3 -0.43 -1.61
- - - - - - -2.49 - -0.15 - -2.59 - 1.32 2.01 - 1.68 -1.57 3.01 -0.63 -
0.92 0.49 -0.06 -3.66 -5.83 -2.33 0.41 -3.37 -0.46 -0.98 -1.14 0.7 0.76 1.14 0.57 -0.83 0.22 0.18 0.13 0.46
- 0.95 0.38 1.29 0.99 -0.03 -6.15 0.22 0.59 -1.34 0.45 -2.03 0.16 1.02 -8.51 -7.56 -0.17 -0.34 -3.8 0.81
- - - - - - 0.07 - - - - - 1.06 1.21 - - 1.04 3.41 0.89 -
- 1.23 -0.61 -2.13 -4.31 - -0.25 - -1.8 - -1.97 0.39 0.68 1.34 1.05 0.64 0.59 0.3 -0.41 1.46
-0.3 0.49 0.72 -0.32 -0.17 -0.15 -0.82 -0.37 -0.18 -0.99 0.19 -0.3 -0.34 -0.21 0.24 -0.44 0.36 0.48 0.29 0.47
3.84 -6.23 -6.73 -8.35 -11.0 -7.5 -4.86 -6.07 -3.09 -0.73 -1.81 -2.42 -3.17 -1.86 -1.85 -3.56 -4.29 0.81 0.92 -
4.01 -6.75 -6.66 -9.08 -9.94 -6.49 -5.48 -4.62 -6.21 -1.47 -2.21 -2.68 -3.2 -2.01 -2.05 -3.6 -4.87 0.14 0.26 -7.08
3.93 -5.07 -3.34 -7.51 -7.89 -5.33 -3.75 -4.47 -7.92 -1.69 -1.66 -2.27 -2.73 -1.68 -1.58 -3.13 -3.53 0.24 0.49 -5.56
-2.34 -0.78 -1.16 0.29 0.95 1.43 -3.28 1.01 -1.64 0.08 0.87 -1.19 0.39 0.64 -1.71 0.45 -0.26 -0.29 -0.13 -4.87
- 1.59 1.06 -1.27 -1.38 -2.18 -1.15 -1.29 0.3 - -0.56 -0.53 -0.28 0.28 -0.15 -2.0 1.2 0.44 -1.91 1.73
- -2.1 - - - -3.16 3.83 - 0.43 0.62 -0.62 - -3.3 -3.64 -3.81 -3.39 -2.9 -2.0 0.2 -
- - 4.26 - - - - - - - - - - - - - - -0.64 -2.59 -
0.49 -3.78 -1.26 - - - 2.78 - 1.58 1.99 -0.29 -2.9 -1.83 -1.81 -0.99 -2.17 -2.48 -1.86 0.53 -2.83
- - - - - - - - - - - - - - - - - 4.32 - -
- - - - - - - - - - - - - - - - - 4.32 - -
0.3 -0.37 -1.05 -3.64 -3.22 -3.95 -0.79 -3.99 1.64 0.41 -0.75 -0.34 -0.57 -0.17 0.15 -0.24 -0.28 0.97 1.67 0.38
- - - - - - - - - - - - 3.84 - - - 1.2 -0.01 1.24 -
1.8 -0.46 -0.53 -3.37 -1.75 -2.13 -1.58 -3.75 -1.72 -0.33 1.14 -2.85 -0.49 -0.97 0.48 -1.29 0.97 1.4 1.19 -0.45
1.3 -1.65 0.61 - - -3.41 3.1 -0.04 -0.71 -7.05 -2.55 -0.39 -1.7 -4.14 -1.24 0.37 -1.03 -1.53 -0.65 -0.11
- 0.09 -0.32 -0.56 -1.65 -0.24 -6.1 -2.43 2.61 -0.96 -0.4 -4.17 0.71 1.95 -23.75 0.5 -0.81 -0.07 -2.28 -7.8
- - - - - - - - - - - 2.36 - 1.29 - 2.06 -0.79 2.72 0.17 -
- - - - - - 2.7 - - - -0.41 - 2.14 2.06 - - - 0.78 1.3 -
- -0.28 - -0.9 -0.74 0.75 2.62 0.71 - - -0.44 - 0.43 0.26 0.56 - -0.76 0.19 1.07 -
- - - - - - - - - - - - - - - - - 4.02 1.91 -
- 3.34 - - - - - - - - - - - 2.3 - - -20.03 2.26 -2.49 -
- - - - - - - - - - 4.2 - - - - - - 0.75 - -
-2.65 -1.09 -0.32 -7.22 - -3.0 -0.53 - 2.61 2.8 0.93 -3.72 -1.66 -1.03 -3.4 -2.04 -1.66 -0.54 -1.3 -2.65
- - - - - - - - - - - - - - - - - - 4.32 -
- - - - - - - - - - - - - - - - - 4.32 - -
0.73 -0.02 -0.61 0.34 -0.83 -1.22 -2.02 -0.98 -0.56 0.53 0.05 0.07 0.23 0.13 0.36 -0.51 -0.14 0.73 0.23 0.58
- - - -2.88 - - - - - 1.71 -0.22 - -2.64 -1.27 -0.36 - - 2.87 2.82 -
-0.5 -0.24 -0.39 0.63 0.23 -0.29 -1.18 -0.39 -0.05 -0.44 -0.16 0.17 0.53 0.61 0.49 -0.3 0.05 0.15 0.08 -0.26
- - - - - - - - 4.26 - - - - - - - - -0.18 - -
-0.92 -1.31 -1.93 -2.12 -2.88 -3.18 3.26 - 1.03 0.27 -1.01 -2.4 -0.89 -0.46 -1.56 -2.65 -1.47 -0.07 0.74 -3.76
- - - - - - - - - - 0.64 - - 2.62 - - - 1.93 3.08 -
- - - - - - 3.18 - - 3.09 0.66 - -3.4 - - - -5.14 -2.61 -0.8 -
- -1.82 - - - - -2.72 - - 0.85 -1.21 1.05 -0.19 0.93 -1.0 0.67 -0.22 2.96 0.82 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.