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Gene | ATCC 44394, early decay stage, 0-5 mm | ATCC 44394, middle late decay stage, 15-20 mm | ATCC 44394, late decay stage, 30-35 mm | SB12 | MAD698-R, early decay stage, 0-5 mm | MAD698-R, middle late decay stage, 15-20 mm | MAD698-R, late decay stage, 30-35 mm | MAD698-R | Pure culture | week 6, furfural alcohol (FA10) treated wood | week 6, furfural alcohol (FA40) treated wood | week 6, furfural alcohol (FA70) treated wood | week 9, furfural alcohol (FA40) treated wood | week 3, untreated wood | week 4, untreated wood | week 3, furfural alcohol (FA10) treated wood | week 3, furfural alcohol (FA40) treated wood | week 3, furfural alcohol (FA70) treated wood | week 9, furfural alcohol (FA10) treated wood | week 9, furfural alcohol (FA70) treated wood | week 12, furfural alcohol (FA40) treated wood | week 12, furfural alcohol (FA70) treated wood | week 15, furfural alcohol (FA40) treated wood | week 15, furfural alcohol (FA70) treated wood | week 18, furfural alcohol (FA40) treated wood | week 18, furfural alcohol (FA70) treated wood | week 1, untreated wood | week 2, untreated wood | week 5, untreated wood |
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46.98 | 31.6 | 11.75 | 285.7 | 57.94 | 31.6 | 11.75 | 181.35 | 207.47 | 6.26 | 26.92 | 285.05 | 21.36 | 72.17 | 9.0 | 61.66 | 143.76 | 449.87 | 4.08 | 281.25 | 7.43 | 43.8 | 11.88 | 194.28 | 13.5 | 101.56 | 874.79 | 55.54 | 13.36 | |
1303.87 | 360.18 | 131.75 | 5.59 | 1024.75 | 360.18 | 131.75 | 3.72 | 400.6 | 55.96 | 99.44 | 54.27 | 90.54 | 225.67 | 179.86 | 222.65 | 30.7 | 197.2 | 24.26 | 102.36 | 37.7 | 97.95 | 12.76 | 70.7 | 14.45 | 50.72 | 778.19 | 276.76 | 221.53 | |
1.19 | 1.11 | 0.4 | 0.0 | 1.88 | 1.11 | 0.4 | 4.05 | 13.28 | 4.17 | 2.47 | 19.35 | 5.23 | 10.48 | 4.01 | 12.95 | 25.79 | 33.48 | 2.33 | 18.06 | 3.59 | 7.46 | 2.41 | 13.23 | 2.19 | 9.69 | 84.59 | 11.32 | 3.08 | |
22.98 | 2.47 | 2.74 | 5.74 | 18.67 | 2.47 | 2.74 | 0.47 | 3.83 | 0.0 | 0.0 | 0.77 | 0.3 | 0.66 | 0.73 | 0.0 | 0.0 | 0.61 | 0.41 | 0.0 | 0.32 | 0.71 | 0.0 | 1.06 | 0.11 | 1.02 | 7.29 | 0.09 | 0.43 | |
81.69 | 31.18 | 19.76 | 43.18 | 77.97 | 31.18 | 19.76 | 18.2 | 14.22 | 14.98 | 14.38 | 15.63 | 14.62 | 30.53 | 23.04 | 30.12 | 13.97 | 34.35 | 8.15 | 19.31 | 13.92 | 21.62 | 9.42 | 19.7 | 7.98 | 24.39 | 63.07 | 26.86 | 14.57 | |
44.62 | 13.28 | 18.96 | 0.0 | 33.15 | 13.28 | 18.96 | 24.38 | 17.06 | 5.66 | 4.84 | 2.13 | 3.14 | 2.41 | 3.59 | 2.67 | 1.71 | 1.63 | 4.65 | 3.63 | 2.05 | 1.64 | 3.99 | 1.91 | 4.68 | 4.3 | 31.18 | 5.18 | 3.71 | |
3.98 | 2.27 | 2.06 | 0.0 | 6.5 | 2.27 | 2.06 | 12.97 | 28.06 | 5.81 | 4.77 | 13.42 | 7.21 | 3.74 | 4.08 | 5.18 | 14.05 | 33.09 | 3.65 | 12.81 | 6.36 | 11.62 | 3.38 | 14.65 | 7.71 | 33.71 | 83.02 | 5.43 | 2.91 | |
29.76 | 4.86 | 4.41 | 41.31 | 24.8 | 4.86 | 4.41 | 4.55 | 87.56 | 1.71 | 2.3 | 2.09 | 3.73 | 3.86 | 8.13 | 5.93 | 4.29 | 11.25 | 5.97 | 2.83 | 3.06 | 7.42 | 1.09 | 3.36 | 2.9 | 1.93 | 103.52 | 5.29 | 3.3 | |
32.02 | 21.7 | 17.18 | 36.77 | 29.77 | 21.7 | 17.18 | 49.3 | 51.99 | 29.66 | 31.63 | 55.0 | 28.67 | 42.23 | 37.39 | 37.95 | 27.57 | 57.85 | 27.42 | 45.16 | 31.0 | 44.82 | 30.03 | 50.75 | 41.07 | 56.84 | 143.34 | 39.1 | 35.2 | |
0.33 | 1.62 | 1.53 | 10.41 | 1.78 | 1.62 | 1.53 | 9.01 | 4.93 | 1.24 | 0.0 | 0.89 | 3.82 | 1.52 | 1.82 | 2.63 | 3.93 | 7.1 | 8.43 | 3.09 | 1.38 | 3.59 | 2.05 | 3.78 | 6.37 | 1.65 | 54.05 | 1.54 | 2.54 | |
28.61 | 26.04 | 35.24 | 34.79 | 29.41 | 26.04 | 35.24 | 19.02 | 21.77 | 31.97 | 25.93 | 25.11 | 29.8 | 34.12 | 28.17 | 31.24 | 37.72 | 41.21 | 27.39 | 26.97 | 35.4 | 30.85 | 38.03 | 33.19 | 51.91 | 29.31 | 90.08 | 34.46 | 32.39 | |
1.63 | 1.13 | 0.92 | 0.61 | 1.25 | 1.13 | 0.92 | 1.3 | 70.27 | 11.15 | 5.44 | 30.78 | 7.28 | 6.12 | 8.45 | 23.37 | 21.58 | 21.06 | 6.19 | 25.39 | 9.97 | 12.6 | 9.35 | 24.3 | 8.19 | 29.39 | 154.35 | 8.52 | 6.13 | |
262.06 | 80.69 | 51.11 | 41.8 | 228.9 | 80.69 | 51.11 | 186.99 | 119.79 | 42.91 | 33.45 | 45.85 | 42.96 | 55.91 | 38.84 | 52.83 | 33.06 | 84.29 | 14.2 | 46.68 | 29.95 | 64.46 | 33.55 | 54.06 | 36.76 | 63.37 | 164.43 | 40.93 | 36.45 | |
62.57 | 8.84 | 14.11 | 9.16 | 47.02 | 8.84 | 14.11 | 12.1 | 10.5 | 5.0 | 3.28 | 5.86 | 10.2 | 6.27 | 6.33 | 8.93 | 0.68 | 4.34 | 6.29 | 5.32 | 5.89 | 5.12 | 6.48 | 5.86 | 7.64 | 5.83 | 38.45 | 3.06 | 6.14 | |
5.62 | 5.51 | 6.03 | 6.51 | 4.94 | 5.51 | 6.03 | 9.69 | 12.13 | 1.73 | 1.19 | 6.25 | 0.98 | 2.16 | 1.33 | 1.42 | 2.69 | 4.31 | 0.53 | 7.16 | 0.69 | 0.53 | 0.4 | 6.66 | 1.74 | 7.24 | 30.98 | 1.91 | 1.14 | |
16.05 | 15.1 | 16.43 | 7.33 | 17.05 | 15.1 | 16.43 | 24.61 | 166.76 | 25.59 | 19.22 | 70.52 | 20.28 | 23.96 | 23.33 | 42.25 | 26.69 | 77.27 | 12.58 | 55.29 | 20.05 | 29.5 | 18.22 | 51.62 | 25.08 | 56.47 | 217.35 | 26.88 | 19.4 | |
0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.28 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 3.14 | 0.0 | 0.0 | |
45.98 | 31.7 | 27.3 | 47.7 | 45.48 | 31.7 | 27.3 | 31.36 | 11.25 | 14.01 | 21.33 | 34.19 | 19.49 | 25.74 | 18.75 | 24.85 | 38.01 | 48.04 | 13.76 | 36.05 | 15.56 | 21.68 | 12.95 | 31.68 | 18.56 | 39.96 | 89.5 | 20.92 | 15.41 | |
18.6 | 23.34 | 20.76 | 42.04 | 18.63 | 23.34 | 20.76 | 17.79 | 23.84 | 18.87 | 14.76 | 18.65 | 19.54 | 23.81 | 25.98 | 25.26 | 21.12 | 31.76 | 10.92 | 28.74 | 18.19 | 20.76 | 19.51 | 30.6 | 35.56 | 41.98 | 90.49 | 22.78 | 32.28 | |
4.36 | 3.66 | 3.05 | 13.43 | 4.31 | 3.66 | 3.05 | 11.93 | 22.45 | 1.61 | 1.23 | 11.59 | 1.2 | 1.4 | 3.31 | 2.66 | 11.97 | 12.84 | 1.75 | 10.91 | 2.7 | 3.2 | 2.08 | 8.57 | 1.77 | 11.98 | 39.29 | 3.59 | 3.52 | |
15.6 | 17.88 | 14.89 | 41.56 | 15.6 | 17.88 | 14.89 | 33.71 | 65.17 | 19.76 | 17.52 | 41.77 | 24.12 | 23.64 | 23.11 | 25.27 | 43.47 | 58.0 | 18.46 | 45.87 | 16.13 | 27.35 | 18.44 | 29.61 | 33.79 | 38.67 | 186.83 | 25.26 | 30.64 | |
285.32 | 14.19 | 8.02 | 58.49 | 262.55 | 14.19 | 8.02 | 2276.49 | 638.89 | 249.13 | 161.24 | 522.87 | 363.4 | 92.83 | 176.79 | 243.56 | 562.88 | 2075.61 | 388.27 | 402.12 | 374.23 | 759.6 | 138.8 | 611.44 | 318.29 | 694.11 | 5534.08 | 57.01 | 232.44 | |
0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.09 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.1 | 0.0 | 0.95 | 0.0 | 0.0 | |
5.79 | 8.86 | 5.59 | 0.0 | 6.85 | 8.86 | 5.59 | 2.83 | 17.36 | 5.92 | 2.33 | 17.15 | 9.16 | 6.63 | 6.0 | 6.5 | 16.41 | 13.06 | 2.02 | 11.37 | 6.73 | 19.97 | 9.48 | 10.86 | 11.06 | 8.66 | 65.02 | 3.73 | 5.34 | |
0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.12 | 0.0 | 0.0 | |
11.32 | 9.19 | 9.1 | 9.39 | 11.22 | 9.19 | 9.1 | 19.97 | 12.7 | 9.96 | 10.27 | 13.83 | 11.18 | 11.86 | 11.87 | 16.6 | 8.9 | 18.89 | 8.82 | 16.79 | 13.44 | 13.45 | 13.1 | 19.58 | 15.69 | 21.89 | 47.57 | 15.43 | 11.84 | |
10.17 | 5.73 | 6.63 | 25.96 | 11.3 | 5.73 | 6.63 | 40.12 | 22.78 | 14.14 | 14.03 | 28.07 | 16.56 | 19.42 | 17.3 | 18.59 | 30.99 | 29.42 | 10.46 | 30.2 | 19.37 | 21.1 | 15.37 | 32.71 | 26.43 | 41.45 | 99.94 | 18.8 | 15.97 | |
3590.86 | 530.39 | 445.29 | 42.58 | 2952.81 | 530.39 | 445.29 | 19.81 | 1570.29 | 534.95 | 267.51 | 242.12 | 234.76 | 572.8 | 734.87 | 565.14 | 236.05 | 662.59 | 700.21 | 157.82 | 192.95 | 280.92 | 165.59 | 314.97 | 114.02 | 220.7 | 2481.51 | 228.56 | 626.49 | |
4.06 | 3.39 | 3.39 | 1.02 | 3.78 | 3.39 | 3.39 | 8.22 | 40.36 | 8.34 | 6.86 | 11.82 | 8.97 | 8.49 | 8.18 | 11.36 | 4.46 | 15.65 | 6.99 | 8.1 | 9.66 | 12.0 | 8.43 | 12.61 | 7.85 | 9.98 | 33.79 | 8.69 | 7.8 | |
7.25 | 6.42 | 6.51 | 7.33 | 7.98 | 6.42 | 6.51 | 33.79 | 13.93 | 9.07 | 6.26 | 21.09 | 10.68 | 12.16 | 11.66 | 13.56 | 28.86 | 15.7 | 9.07 | 21.25 | 7.96 | 8.7 | 9.05 | 32.28 | 11.25 | 36.57 | 62.31 | 12.81 | 10.93 | |
1.71 | 2.19 | 1.95 | 16.01 | 1.86 | 2.19 | 1.95 | 15.84 | 4.64 | 3.77 | 11.28 | 16.32 | 8.12 | 7.28 | 5.75 | 7.0 | 12.89 | 22.56 | 4.26 | 19.24 | 9.5 | 12.22 | 8.67 | 24.59 | 8.11 | 27.84 | 81.71 | 10.98 | 4.98 | |
103.04 | 24.62 | 16.84 | 0.0 | 92.73 | 24.62 | 16.84 | 3.04 | 226.56 | 5.65 | 3.27 | 16.05 | 10.79 | 16.72 | 10.38 | 13.28 | 7.37 | 56.51 | 4.26 | 15.22 | 14.35 | 11.66 | 16.99 | 18.66 | 25.48 | 33.51 | 221.57 | 3.81 | 9.3 | |
55.97 | 14.26 | 13.65 | 81.24 | 56.88 | 14.26 | 13.65 | 59.81 | 15.95 | 21.54 | 15.71 | 42.63 | 15.75 | 28.84 | 36.79 | 27.64 | 27.36 | 47.17 | 18.03 | 42.28 | 15.68 | 19.5 | 18.94 | 43.1 | 49.71 | 45.16 | 152.48 | 10.77 | 43.81 | |
5.0 | 5.41 | 7.02 | 4.8 | 4.26 | 5.41 | 7.02 | 8.36 | 34.34 | 4.51 | 3.36 | 10.36 | 2.7 | 5.42 | 3.7 | 5.96 | 6.79 | 7.25 | 1.86 | 7.77 | 3.94 | 3.92 | 7.15 | 10.08 | 6.31 | 10.25 | 36.79 | 4.48 | 3.95 | |
28.78 | 29.51 | 34.18 | 36.2 | 29.62 | 29.51 | 34.18 | 44.04 | 56.93 | 45.39 | 34.99 | 39.69 | 40.17 | 39.18 | 42.48 | 41.23 | 47.38 | 43.94 | 30.88 | 41.7 | 49.71 | 41.14 | 43.73 | 48.37 | 70.17 | 48.04 | 118.01 | 35.61 | 44.23 | |
1701.68 | 246.01 | 189.84 | 0.0 | 1454.97 | 246.01 | 189.84 | 34.54 | 3165.07 | 604.09 | 279.65 | 251.39 | 261.08 | 652.92 | 948.07 | 630.02 | 166.52 | 733.41 | 892.65 | 164.33 | 216.84 | 274.77 | 206.56 | 299.76 | 129.72 | 206.85 | 2543.79 | 249.49 | 714.0 | |
4.87 | 2.52 | 2.79 | 3.58 | 4.4 | 2.52 | 2.79 | 11.23 | 10.58 | 0.83 | 0.25 | 0.0 | 1.22 | 0.37 | 0.77 | 0.36 | 0.43 | 3.66 | 0.02 | 0.11 | 0.05 | 0.17 | 0.62 | 0.58 | 0.4 | 3.16 | 29.47 | 1.2 | 1.83 | |
0.0 | 0.0 | 0.08 | 7.14 | 0.0 | 0.0 | 0.08 | 2.25 | 2.31 | 3.39 | 2.44 | 1.03 | 0.41 | 0.59 | 1.63 | 1.03 | 1.18 | 4.87 | 2.37 | 3.89 | 0.81 | 0.44 | 1.23 | 0.73 | 0.37 | 1.2 | 42.63 | 0.24 | 1.28 | |
1.82 | 0.9 | 0.44 | 6.72 | 1.21 | 0.9 | 0.44 | 0.34 | 0.09 | 0.05 | 1.46 | 0.3 | 0.54 | 0.23 | 0.32 | 0.42 | 0.0 | 1.43 | 0.38 | 1.29 | 0.89 | 0.0 | 0.66 | 0.86 | 0.0 | 0.0 | 8.17 | 0.72 | 0.32 | |
3.86 | 5.78 | 4.13 | 29.83 | 4.56 | 5.78 | 4.13 | 4.35 | 17.91 | 5.32 | 4.37 | 11.23 | 7.67 | 5.08 | 4.22 | 7.01 | 14.49 | 62.51 | 4.79 | 10.44 | 7.67 | 16.73 | 8.83 | 17.56 | 10.87 | 28.56 | 130.01 | 5.37 | 4.0 | |
12.44 | 6.2 | 4.87 | 38.92 | 13.05 | 6.2 | 4.87 | 25.24 | 97.91 | 20.69 | 18.4 | 22.24 | 14.74 | 21.67 | 24.29 | 21.55 | 14.85 | 34.6 | 22.25 | 25.7 | 16.97 | 17.05 | 17.61 | 29.29 | 18.4 | 27.0 | 126.69 | 14.71 | 20.93 | |
23.35 | 2.42 | 1.92 | 3.42 | 18.93 | 2.42 | 1.92 | 1.75 | 78.98 | 6.67 | 0.29 | 0.81 | 5.09 | 1.15 | 9.97 | 2.45 | 0.8 | 18.9 | 4.39 | 2.48 | 2.16 | 5.0 | 2.46 | 20.35 | 19.43 | 14.57 | 130.94 | 1.57 | 5.92 | |
18.4 | 15.91 | 14.32 | 0.0 | 22.5 | 15.91 | 14.32 | 31.97 | 196.54 | 24.74 | 24.33 | 24.81 | 13.73 | 15.28 | 19.74 | 10.72 | 2.14 | 33.97 | 8.25 | 8.32 | 17.14 | 22.71 | 13.41 | 35.65 | 20.17 | 41.09 | 180.73 | 19.6 | 16.12 | |
54.53 | 44.3 | 44.25 | 74.46 | 55.51 | 44.3 | 44.25 | 60.05 | 39.51 | 51.23 | 48.77 | 53.22 | 43.0 | 46.72 | 53.1 | 46.46 | 51.4 | 54.63 | 46.04 | 47.39 | 53.01 | 54.32 | 55.38 | 62.52 | 62.22 | 61.52 | 117.19 | 47.21 | 49.3 | |
0.73 | 0.64 | 0.54 | 8.43 | 0.58 | 0.64 | 0.54 | 1.81 | 9.17 | 3.06 | 1.12 | 4.97 | 2.24 | 1.61 | 2.41 | 2.02 | 5.14 | 4.41 | 1.4 | 8.24 | 2.97 | 4.05 | 1.69 | 8.27 | 2.07 | 5.2 | 19.63 | 1.54 | 2.13 | |
1.1 | 0.77 | 0.49 | 18.35 | 1.22 | 0.77 | 0.49 | 5.32 | 77.83 | 2.66 | 0.68 | 9.92 | 3.28 | 1.97 | 2.04 | 4.42 | 1.98 | 15.4 | 1.79 | 16.15 | 0.8 | 0.59 | 0.68 | 7.72 | 0.94 | 12.96 | 75.87 | 3.65 | 1.15 | |
0.66 | 0.24 | 0.86 | 0.13 | 0.6 | 0.24 | 0.86 | 0.87 | 2.11 | 0.49 | 0.66 | 0.8 | 0.82 | 1.44 | 0.47 | 0.64 | 0.74 | 2.89 | 0.46 | 0.83 | 0.31 | 0.61 | 0.16 | 0.36 | 0.74 | 2.06 | 14.1 | 0.91 | 0.72 | |
3.21 | 6.25 | 6.56 | 12.78 | 3.45 | 6.25 | 6.56 | 4.91 | 5.27 | 10.8 | 7.11 | 8.76 | 10.38 | 10.11 | 6.98 | 9.31 | 6.49 | 11.99 | 7.25 | 11.72 | 14.15 | 9.67 | 11.99 | 13.05 | 17.19 | 13.46 | 33.13 | 11.64 | 10.74 | |
0.0 | 0.0 | 0.0 | 0.63 | 0.0 | 0.0 | 0.0 | 0.0 | 0.44 | 0.0 | 0.0 | 0.02 | 0.08 | 0.06 | 0.03 | 0.0 | 0.0 | 0.0 | 0.0 | 0.08 | 0.17 | 0.0 | 0.0 | 0.13 | 0.0 | 0.0 | 1.94 | 0.27 | 0.09 | |
9.55 | 1.09 | 0.36 | 0.0 | 7.85 | 1.09 | 0.36 | 0.54 | 681.75 | 31.72 | 11.64 | 4.59 | 20.99 | 4.65 | 45.94 | 11.65 | 7.4 | 98.53 | 26.28 | 14.06 | 19.57 | 24.69 | 34.31 | 74.01 | 84.95 | 70.35 | 741.04 | 11.5 | 30.37 | |
3.8 | 2.9 | 3.93 | 19.51 | 3.53 | 2.9 | 3.93 | 10.79 | 34.24 | 20.2 | 18.83 | 17.3 | 18.61 | 13.29 | 15.27 | 18.67 | 11.54 | 23.05 | 12.99 | 18.12 | 23.29 | 18.51 | 18.53 | 25.37 | 40.95 | 24.72 | 88.95 | 13.64 | 16.34 | |
1.97 | 0.95 | 1.89 | 8.56 | 2.23 | 0.95 | 1.89 | 3.78 | 0.41 | 0.0 | 0.0 | 0.01 | 0.34 | 0.64 | 0.21 | 0.04 | 0.0 | 0.38 | 0.08 | 0.07 | 0.0 | 0.17 | 0.0 | 0.0 | 0.21 | 1.79 | 11.58 | 0.09 | 0.37 | |
15.63 | 9.39 | 8.21 | 78.48 | 15.75 | 9.39 | 8.21 | 22.41 | 83.96 | 18.68 | 12.08 | 39.88 | 17.38 | 21.39 | 19.21 | 22.86 | 31.97 | 43.61 | 23.11 | 22.34 | 16.72 | 21.2 | 14.73 | 33.14 | 33.12 | 29.23 | 108.31 | 16.2 | 23.54 | |
0.69 | 0.0 | 0.28 | 0.0 | 0.46 | 0.0 | 0.28 | 0.38 | 0.3 | 0.0 | 0.15 | 0.1 | 0.02 | 0.06 | 0.13 | 0.0 | 0.0 | 0.12 | 0.0 | 0.26 | 0.11 | 0.11 | 0.32 | 0.0 | 0.1 | 0.0 | 3.92 | 0.04 | 0.13 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)