View as: (view zlog-transformed or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Showing raw values)
Gene | ATCC 44394, early decay stage, 0-5 mm | ATCC 44394, middle late decay stage, 15-20 mm | ATCC 44394, late decay stage, 30-35 mm | SB12 | MAD698-R, early decay stage, 0-5 mm | MAD698-R, middle late decay stage, 15-20 mm | MAD698-R, late decay stage, 30-35 mm | MAD698-R | Pure culture | week 6, furfural alcohol (FA10) treated wood | week 6, furfural alcohol (FA40) treated wood | week 6, furfural alcohol (FA70) treated wood | week 9, furfural alcohol (FA40) treated wood | week 3, untreated wood | week 4, untreated wood | week 3, furfural alcohol (FA10) treated wood | week 3, furfural alcohol (FA40) treated wood | week 3, furfural alcohol (FA70) treated wood | week 9, furfural alcohol (FA10) treated wood | week 9, furfural alcohol (FA70) treated wood | week 12, furfural alcohol (FA40) treated wood | week 12, furfural alcohol (FA70) treated wood | week 15, furfural alcohol (FA40) treated wood | week 15, furfural alcohol (FA70) treated wood | week 18, furfural alcohol (FA40) treated wood | week 18, furfural alcohol (FA70) treated wood | week 1, untreated wood | week 2, untreated wood | week 5, untreated wood |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
2.33 | 1.08 | 1.26 | 91.12 | 2.24 | 1.08 | 1.26 | 113.37 | 18.77 | 1.24 | 0.6 | 2.79 | 1.47 | 0.63 | 0.81 | 0.47 | 5.73 | 1.5 | 0.59 | 1.78 | 0.9 | 2.47 | 0.09 | 1.49 | 5.06 | 20.33 | 3.07 | 0.35 | 1.31 | |
27.16 | 39.69 | 26.07 | 67.44 | 28.55 | 39.69 | 26.07 | 166.67 | 10.23 | 15.11 | 14.46 | 37.54 | 13.16 | 11.31 | 15.16 | 16.19 | 14.23 | 30.96 | 9.42 | 28.37 | 18.81 | 17.24 | 14.92 | 23.64 | 20.09 | 19.69 | 40.96 | 9.29 | 13.08 | |
0.51 | 0.45 | 0.34 | 2.91 | 0.69 | 0.45 | 0.34 | 12.75 | 0.53 | 0.25 | 0.0 | 0.26 | 0.0 | 0.27 | 0.07 | 0.75 | 0.0 | 0.32 | 1.17 | 0.34 | 0.04 | 0.4 | 1.08 | 0.43 | 0.44 | 0.25 | 0.43 | 0.35 | 0.12 | |
12.33 | 21.59 | 20.23 | 18.05 | 13.3 | 21.59 | 20.23 | 81.5 | 0.67 | 2.45 | 5.77 | 1.42 | 3.24 | 2.29 | 3.01 | 13.29 | 2.11 | 4.95 | 11.8 | 0.88 | 3.6 | 3.49 | 4.29 | 2.27 | 4.25 | 0.61 | 1.31 | 3.25 | 2.16 | |
23.0 | 17.92 | 33.73 | 41.65 | 20.9 | 17.92 | 33.73 | 60.9 | 1.76 | 5.22 | 5.56 | 2.5 | 4.08 | 3.4 | 3.94 | 3.28 | 8.32 | 2.44 | 4.35 | 5.04 | 4.83 | 4.14 | 4.28 | 4.87 | 3.85 | 4.81 | 3.2 | 2.46 | 3.49 | |
16.52 | 10.46 | 10.45 | 5.02 | 18.12 | 10.46 | 10.45 | 53.56 | 7.45 | 9.05 | 14.46 | 7.14 | 9.77 | 13.37 | 9.83 | 11.89 | 10.48 | 15.77 | 6.76 | 10.64 | 7.73 | 7.21 | 13.31 | 14.25 | 10.81 | 10.79 | 22.76 | 13.31 | 8.07 | |
0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.11 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | |
10.96 | 5.81 | 9.01 | 171.53 | 12.5 | 5.81 | 9.01 | 548.64 | 14.08 | 6.9 | 11.58 | 64.23 | 6.42 | 6.67 | 4.57 | 12.35 | 9.6 | 36.67 | 6.03 | 41.91 | 5.84 | 10.27 | 10.1 | 40.48 | 10.79 | 32.29 | 214.74 | 5.61 | 4.91 | |
1.97 | 1.55 | 1.11 | 0.04 | 1.81 | 1.55 | 1.11 | 490.78 | 0.75 | 0.82 | 0.64 | 0.4 | 0.98 | 0.82 | 0.83 | 1.52 | 0.42 | 0.68 | 0.63 | 1.46 | 1.2 | 0.56 | 0.26 | 0.77 | 0.42 | 0.22 | 0.61 | 0.7 | 0.95 | |
3.25 | 2.7 | 2.42 | 1.51 | 3.44 | 2.7 | 2.42 | 558.71 | 1.62 | 0.28 | 0.43 | 1.31 | 0.94 | 1.03 | 0.51 | 1.13 | 0.09 | 1.78 | 0.23 | 0.72 | 0.63 | 2.21 | 0.5 | 1.13 | 1.11 | 0.7 | 1.62 | 1.69 | 0.4 | |
4.47 | 6.02 | 8.06 | 11.5 | 4.08 | 6.02 | 8.06 | 51.42 | 2.26 | 2.77 | 1.75 | 1.91 | 2.43 | 1.62 | 2.67 | 2.28 | 0.41 | 2.92 | 4.8 | 1.92 | 2.85 | 3.8 | 2.12 | 4.2 | 6.96 | 2.09 | 3.54 | 1.05 | 5.05 | |
2.41 | 1.06 | 1.95 | 138.59 | 2.95 | 1.06 | 1.95 | 106.07 | 0.78 | 0.84 | 0.16 | 1.0 | 0.2 | 0.71 | 0.18 | 0.32 | 0.0 | 0.48 | 0.11 | 0.09 | 0.0 | 0.58 | 0.11 | 0.95 | 0.15 | 0.92 | 0.0 | 1.02 | 0.37 | |
23.47 | 40.94 | 57.89 | 237.83 | 20.55 | 40.94 | 57.89 | 260.21 | 24.39 | 7.28 | 21.23 | 25.19 | 16.15 | 17.02 | 8.15 | 14.93 | 18.99 | 25.36 | 7.71 | 18.38 | 17.01 | 21.34 | 25.24 | 23.73 | 36.98 | 20.3 | 38.06 | 24.27 | 6.89 | |
75.5 | 177.28 | 267.89 | 351.7 | 75.0 | 177.28 | 267.89 | 460.07 | 66.68 | 37.85 | 53.83 | 55.06 | 41.48 | 38.43 | 17.51 | 40.34 | 76.25 | 63.64 | 46.02 | 71.89 | 75.72 | 80.58 | 134.08 | 68.95 | 125.27 | 49.07 | 64.94 | 79.7 | 23.63 | |
32.03 | 30.55 | 16.19 | 3.61 | 35.94 | 30.55 | 16.19 | 104.11 | 15.7 | 14.31 | 20.29 | 20.14 | 21.11 | 25.63 | 14.89 | 27.66 | 33.91 | 29.64 | 13.23 | 24.92 | 14.62 | 15.21 | 16.93 | 23.18 | 23.3 | 26.19 | 51.69 | 25.37 | 20.48 | |
15.6 | 6.04 | 5.21 | 0.25 | 14.61 | 6.04 | 5.21 | 29.83 | 0.49 | 0.13 | 0.0 | 0.0 | 0.0 | 0.16 | 0.07 | 0.59 | 0.0 | 0.0 | 0.31 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.09 | 0.0 | 0.0 | 0.0 | 0.0 | |
24.44 | 31.25 | 40.25 | 39.04 | 24.0 | 31.25 | 40.25 | 68.5 | 4.41 | 10.22 | 7.47 | 10.1 | 12.15 | 9.71 | 7.99 | 10.19 | 6.7 | 14.57 | 10.76 | 11.28 | 13.6 | 13.47 | 11.35 | 16.7 | 11.41 | 10.41 | 17.79 | 8.9 | 7.96 | |
5.78 | 6.47 | 5.11 | 0.73 | 5.97 | 6.47 | 5.11 | 44.14 | 4.94 | 3.83 | 1.18 | 3.18 | 2.68 | 4.67 | 4.01 | 3.93 | 1.84 | 2.02 | 2.07 | 2.54 | 1.66 | 2.44 | 2.56 | 2.12 | 2.91 | 3.24 | 3.16 | 3.94 | 3.23 | |
0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.22 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | |
14.18 | 2.05 | 2.06 | 57.79 | 15.01 | 2.05 | 2.06 | 41.51 | 17.88 | 5.21 | 10.46 | 13.92 | 7.67 | 7.71 | 5.77 | 8.82 | 3.46 | 12.33 | 5.1 | 14.98 | 8.58 | 10.17 | 7.27 | 15.1 | 4.69 | 16.33 | 5.82 | 5.96 | 7.25 | |
8.02 | 4.75 | 7.98 | 118.03 | 7.87 | 4.75 | 7.98 | 221.0 | 5.89 | 3.37 | 2.28 | 4.39 | 2.4 | 1.75 | 2.16 | 2.87 | 3.0 | 6.25 | 2.92 | 3.02 | 2.37 | 4.0 | 4.19 | 3.75 | 5.95 | 4.82 | 21.0 | 1.16 | 2.53 | |
25.66 | 21.62 | 14.65 | 91.15 | 28.25 | 21.62 | 14.65 | 120.32 | 9.76 | 9.83 | 12.97 | 18.02 | 14.89 | 20.68 | 10.44 | 18.88 | 32.48 | 19.72 | 8.62 | 14.56 | 9.68 | 17.15 | 12.67 | 13.38 | 18.37 | 18.0 | 36.58 | 18.63 | 13.9 | |
19.96 | 18.42 | 13.0 | 60.15 | 24.91 | 18.42 | 13.0 | 128.24 | 16.25 | 13.56 | 11.74 | 17.02 | 11.13 | 15.82 | 13.08 | 16.79 | 17.22 | 20.46 | 7.11 | 18.04 | 9.7 | 13.12 | 14.61 | 17.3 | 15.24 | 10.9 | 26.33 | 14.32 | 12.52 | |
7.46 | 0.95 | 0.46 | 4.47 | 6.9 | 0.95 | 0.46 | 321.19 | 7.77 | 4.02 | 3.48 | 8.24 | 4.85 | 3.44 | 3.12 | 3.09 | 2.83 | 12.94 | 2.23 | 9.98 | 4.89 | 6.59 | 5.11 | 10.33 | 4.09 | 5.66 | 4.57 | 2.63 | 3.5 | |
3.15 | 1.28 | 1.68 | 0.0 | 3.28 | 1.28 | 1.68 | 67.32 | 0.0 | 0.17 | 0.0 | 0.89 | 0.23 | 0.12 | 0.18 | 0.26 | 0.0 | 0.4 | 0.28 | 0.05 | 0.05 | 1.21 | 0.13 | 0.69 | 0.15 | 0.0 | 0.0 | 0.0 | 0.55 | |
0.38 | 0.0 | 0.0 | 0.0 | 0.25 | 0.0 | 0.0 | 0.61 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | |
2.68 | 2.47 | 2.18 | 9.24 | 2.14 | 2.47 | 2.18 | 74.23 | 4.52 | 0.91 | 1.98 | 3.11 | 1.28 | 1.86 | 1.22 | 1.19 | 1.36 | 2.29 | 1.03 | 4.16 | 0.87 | 0.71 | 1.26 | 2.09 | 0.66 | 3.54 | 2.21 | 1.17 | 0.63 | |
5.45 | 4.29 | 4.47 | 58.03 | 4.97 | 4.29 | 4.47 | 74.84 | 5.15 | 1.07 | 1.14 | 1.79 | 1.89 | 2.21 | 1.53 | 2.29 | 0.86 | 4.96 | 1.32 | 3.14 | 1.38 | 1.81 | 1.56 | 3.73 | 1.33 | 3.61 | 1.73 | 1.68 | 1.48 | |
0.31 | 0.29 | 0.09 | 0.0 | 0.21 | 0.29 | 0.09 | 0.15 | 0.06 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.04 | 0.0 | 0.0 | 0.06 | 0.0 | 0.03 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | |
8.21 | 7.68 | 6.58 | 33.56 | 7.96 | 7.68 | 6.58 | 68.54 | 27.91 | 8.31 | 12.04 | 14.49 | 11.71 | 12.37 | 14.82 | 12.15 | 3.06 | 15.43 | 6.43 | 9.77 | 9.81 | 12.55 | 12.16 | 16.7 | 11.65 | 15.27 | 7.71 | 16.42 | 12.61 | |
8.75 | 11.43 | 6.61 | 0.0 | 10.57 | 11.43 | 6.61 | 37.88 | 4.19 | 0.48 | 1.43 | 0.27 | 1.95 | 3.59 | 2.08 | 0.72 | 0.19 | 2.11 | 0.44 | 0.94 | 1.71 | 1.02 | 2.89 | 1.94 | 0.72 | 5.15 | 19.15 | 1.25 | 1.84 | |
8.75 | 11.43 | 6.61 | 0.0 | 10.57 | 11.43 | 6.61 | 37.88 | 4.19 | 0.48 | 1.43 | 0.27 | 1.95 | 3.59 | 2.08 | 0.72 | 0.19 | 2.11 | 0.44 | 0.94 | 1.71 | 1.02 | 2.89 | 1.94 | 0.72 | 5.15 | 19.15 | 1.25 | 1.84 | |
30.59 | 3.11 | 4.68 | 126.49 | 30.95 | 3.11 | 4.68 | 80.55 | 35.99 | 5.4 | 13.71 | 17.77 | 7.57 | 10.02 | 9.09 | 13.37 | 8.91 | 25.7 | 8.99 | 17.78 | 6.14 | 12.29 | 8.68 | 21.76 | 8.41 | 23.07 | 24.33 | 9.64 | 12.59 | |
16.21 | 20.86 | 16.1 | 62.96 | 19.08 | 20.86 | 16.1 | 154.34 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.06 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | |
2.52 | 6.9 | 2.59 | 215.61 | 1.96 | 6.9 | 2.59 | 181.06 | 3.45 | 0.35 | 0.96 | 27.65 | 3.26 | 15.59 | 10.98 | 2.19 | 1.51 | 16.03 | 4.38 | 13.39 | 2.34 | 29.1 | 7.59 | 16.48 | 8.35 | 16.42 | 2.7 | 17.58 | 13.36 | |
1.29 | 1.05 | 1.67 | 2.13 | 1.14 | 1.05 | 1.67 | 44.02 | 4.65 | 2.66 | 5.35 | 5.41 | 3.03 | 6.35 | 6.29 | 5.82 | 7.48 | 6.55 | 2.25 | 7.51 | 6.34 | 4.75 | 2.03 | 4.14 | 3.73 | 10.41 | 3.98 | 5.07 | 6.22 | |
20.98 | 21.87 | 22.28 | 135.72 | 24.71 | 21.87 | 22.28 | 303.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | |
46.71 | 20.65 | 17.09 | 112.08 | 49.46 | 20.65 | 17.09 | 3677.61 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | |
1.03 | 0.65 | 0.67 | 0.0 | 0.85 | 0.65 | 0.67 | 5.87 | 0.0 | 0.04 | 0.11 | 0.41 | 0.05 | 0.02 | 0.06 | 0.0 | 0.27 | 0.03 | 0.0 | 0.22 | 0.39 | 0.0 | 0.02 | 0.04 | 0.34 | 0.52 | 0.0 | 0.27 | 0.33 | |
1.35 | 1.45 | 0.81 | 18.68 | 1.42 | 1.45 | 0.81 | 98.47 | 2.47 | 1.24 | 1.24 | 2.91 | 1.4 | 2.3 | 1.79 | 1.64 | 2.87 | 2.78 | 1.1 | 1.55 | 0.89 | 2.69 | 0.99 | 1.74 | 1.85 | 3.36 | 1.42 | 2.08 | 1.53 | |
7.57 | 5.05 | 7.33 | 82.32 | 7.98 | 5.05 | 7.33 | 61.04 | 16.66 | 4.08 | 3.14 | 6.97 | 1.74 | 3.6 | 2.11 | 2.98 | 4.64 | 4.07 | 1.76 | 7.69 | 3.03 | 2.47 | 3.52 | 8.97 | 4.26 | 11.21 | 22.96 | 2.44 | 2.19 | |
34.14 | 15.83 | 14.18 | 0.25 | 33.13 | 15.83 | 14.18 | 187.14 | 0.12 | 0.13 | 0.0 | 0.0 | 0.06 | 0.14 | 0.08 | 0.32 | 0.0 | 0.11 | 0.02 | 0.12 | 0.06 | 0.0 | 0.0 | 0.06 | 0.17 | 0.0 | 0.0 | 0.0 | 0.04 | |
4.98 | 5.15 | 5.02 | 47.24 | 5.62 | 5.15 | 5.02 | 1480.96 | 4.79 | 2.34 | 3.44 | 4.74 | 3.55 | 2.61 | 3.38 | 4.34 | 3.81 | 5.77 | 3.27 | 6.09 | 3.92 | 4.67 | 3.49 | 6.46 | 3.44 | 3.41 | 3.34 | 3.74 | 3.6 | |
16.66 | 9.2 | 4.93 | 4.37 | 15.9 | 9.2 | 4.93 | 16.49 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.55 | 0.22 | 0.0 | |
90.19 | 101.88 | 102.37 | 459.97 | 94.08 | 101.88 | 102.37 | 272.33 | 65.28 | 82.37 | 98.18 | 113.12 | 89.22 | 94.17 | 83.0 | 91.69 | 115.43 | 119.16 | 79.66 | 96.85 | 85.22 | 104.47 | 82.84 | 115.45 | 108.8 | 122.76 | 114.98 | 105.2 | 81.24 | |
2.46 | 3.34 | 7.3 | 0.0 | 3.97 | 3.34 | 7.3 | 262.62 | 6.97 | 30.97 | 22.26 | 56.72 | 53.11 | 4.45 | 8.82 | 27.67 | 4.71 | 34.92 | 21.98 | 38.57 | 48.66 | 18.38 | 91.63 | 26.46 | 55.95 | 48.38 | 66.32 | 4.06 | 17.85 | |
5.29 | 4.63 | 10.54 | 0.0 | 7.3 | 4.63 | 10.54 | 877.31 | 17.34 | 87.62 | 86.6 | 201.97 | 170.87 | 26.11 | 43.55 | 105.81 | 129.94 | 110.12 | 67.53 | 121.81 | 141.65 | 63.45 | 157.62 | 95.32 | 114.15 | 141.92 | 247.05 | 31.21 | 56.32 | |
4.51 | 7.26 | 32.11 | 227.7 | 5.53 | 7.26 | 32.11 | 564.0 | 4.7 | 10.48 | 11.06 | 34.31 | 24.82 | 5.2 | 6.16 | 12.4 | 13.28 | 14.21 | 8.98 | 15.66 | 18.68 | 8.14 | 25.72 | 13.2 | 17.28 | 19.78 | 38.41 | 5.88 | 9.45 | |
5.01 | 4.18 | 2.4 | 0.42 | 4.89 | 4.18 | 2.4 | 13.9 | 0.59 | 0.04 | 0.28 | 0.35 | 0.01 | 0.02 | 0.09 | 0.08 | 0.0 | 0.11 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.26 | 0.0 | 0.23 | 0.56 | 0.0 | 0.04 | |
10.53 | 8.61 | 7.62 | 30.34 | 11.66 | 8.61 | 7.62 | 79.07 | 4.72 | 2.01 | 2.79 | 4.52 | 2.7 | 1.51 | 1.49 | 1.99 | 6.21 | 5.16 | 1.57 | 3.35 | 2.97 | 2.54 | 3.74 | 4.45 | 3.66 | 3.98 | 8.24 | 1.51 | 1.68 | |
11.57 | 11.4 | 11.91 | 0.0 | 10.93 | 11.4 | 11.91 | 23.34 | 1.24 | 2.24 | 1.89 | 0.88 | 1.76 | 0.74 | 1.53 | 2.17 | 1.61 | 0.66 | 3.05 | 0.7 | 1.95 | 0.91 | 2.23 | 1.04 | 4.53 | 1.61 | 1.15 | 1.24 | 0.96 | |
90.56 | 6.88 | 5.4 | 682.07 | 109.42 | 6.88 | 5.4 | 617.79 | 82.82 | 7.07 | 5.25 | 70.26 | 6.8 | 6.37 | 3.71 | 6.24 | 84.59 | 55.4 | 6.49 | 61.62 | 2.65 | 7.9 | 2.84 | 81.22 | 6.79 | 66.0 | 31.71 | 12.0 | 5.67 | |
19.63 | 31.58 | 28.0 | 153.35 | 19.67 | 31.58 | 28.0 | 79.96 | 34.48 | 30.77 | 28.76 | 34.85 | 26.75 | 25.27 | 28.01 | 26.12 | 25.34 | 27.91 | 27.19 | 25.26 | 25.38 | 23.8 | 24.25 | 33.16 | 31.12 | 26.55 | 46.35 | 27.86 | 36.02 | |
4.42 | 2.28 | 2.61 | 0.09 | 5.2 | 2.28 | 2.61 | 9.4 | 0.12 | 0.12 | 0.0 | 0.12 | 0.01 | 0.03 | 0.01 | 0.2 | 0.18 | 0.11 | 0.0 | 0.0 | 0.07 | 0.0 | 0.06 | 0.11 | 0.4 | 1.43 | 0.08 | 0.0 | 0.0 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)