- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | ATCC 44394, early decay stage, 0-5 mm | ATCC 44394, middle late decay stage, 15-20 mm | ATCC 44394, late decay stage, 30-35 mm | SB12 | MAD698-R, early decay stage, 0-5 mm | MAD698-R, middle late decay stage, 15-20 mm | MAD698-R, late decay stage, 30-35 mm | MAD698-R | Pure culture | week 6, furfural alcohol (FA10) treated wood | week 6, furfural alcohol (FA40) treated wood | week 6, furfural alcohol (FA70) treated wood | week 9, furfural alcohol (FA40) treated wood | week 3, untreated wood | week 4, untreated wood | week 3, furfural alcohol (FA10) treated wood | week 3, furfural alcohol (FA40) treated wood | week 3, furfural alcohol (FA70) treated wood | week 9, furfural alcohol (FA10) treated wood | week 9, furfural alcohol (FA70) treated wood | week 12, furfural alcohol (FA40) treated wood | week 12, furfural alcohol (FA70) treated wood | week 15, furfural alcohol (FA40) treated wood | week 15, furfural alcohol (FA70) treated wood | week 18, furfural alcohol (FA40) treated wood | week 18, furfural alcohol (FA70) treated wood | week 1, untreated wood | week 2, untreated wood | week 5, untreated wood |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.25 | -0.68 | -0.74 | 1.41 | -0.2 | -0.68 | -0.74 | 0.54 | -0.02 | -0.23 | -0.01 | 0.18 | -0.16 | 0.16 | -0.76 | -0.15 | 0.02 | 0.4 | -0.05 | -0.11 | 0.09 | -0.18 | -0.42 | 0.05 | 0.15 | -0.39 | 0.66 | -0.27 | 0.02 | |
| -0.49 | -0.67 | -0.59 | 1.13 | -0.37 | -0.67 | -0.59 | 0.48 | 0.6 | 0.16 | -0.15 | -0.51 | -0.21 | 0.68 | -0.12 | 0.08 | 0.26 | 0.4 | -0.05 | -0.79 | -0.42 | -0.39 | -0.04 | -0.21 | -0.09 | -0.26 | 0.36 | 0.11 | 0.18 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.