Heatmap: Cluster_71 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
log,Glucose,WT,B.Oak
log,Glucose,GAL4L OE,WT,B.Oak
log,Glucose,GAL4L KO,B.Oak
gly,WT
log,YPD,WT,B.Oak
log,alpha,YPD,DIC1-2 KO,B.Oak
log,a,YPD,DIC1-2 KO,B.Oak
log,Acetate,WT,B.Oak
log,alpha,Acetate,DIC1-2 KO,B.Oak
log,a,Acetate,DIC1-2 KO,B.Oak
HD met 48h,WT,B.Oak
HD glu 6h,WT,B.Oak
HD gly 6h,WT,B.Oak
HD met 6h,WT,B.Oak
LD gly 0h,WT,B.Oak
LD glu 24h,WT,B.Oak
LD gly 24h,WT,B.Oak
LD met 24h,WT,B.Oak
LD glu 48h,WT,B.Oak
LD gly 48h,WT,B.Oak
LD met 48h,WT,B.Oak
LD glu 6h,WT,B.Oak
LD gly 6h,WT,B.Oak
LD met 6h,WT,B.Oak
HD gly 0h,HIS4-
HD met 24h,HIS4-
HD met 48h,HIS4-
HD glu 6h,HIS4-
HD gly 6h,HIS4-
HD met 6h,HIS4-
LD gly 0h,HIS4-
LD glu 24h,HIS4-
LD gly 24h,HIS4-
LD met 24h,HIS4-
LD glu 48h,HIS4-
LD gly 48h,HIS4-
LD met 48h,HIS4-
LD glu 6h,HIS4-
LD gly 6h,HIS4-
LD met 6h,HIS4-
HD gly 0h,WT,B.Oak
HD met 24h,WT,B.Oak
fed-batch culture 10h,HIS4-
gly 3h,HIS4-
gly-met 2h,HIS4-
met 12h
met 24h
met 36h
met 48h
met 60h
met 72h
met 84h
met 96h
met 108h
met 120h
met,HIS4-
gly,HIS4-
BMGY,WT,B.Oak
D'Anjou,WT,B.Oak
gly 24h,HIS4-
gly 48h,HIS4-
met 48h,HIS4-
gly 24h,HIS4+
gly 48h,HIS4+
met 48h,HIS4+
gly 24h,WT,B.Oak
gly 48h,WT,B.Oak
met 48h,WT,B.Oak
gly 24h,WT
gly 48h,WT
met 48h,WT
gly 24h,WT,E.Oak
gly 48h,WT,E.Oak
met 48h,WT,E.Oak
gly 24h,WT,Elm
gly 48h,WT,Elm
met 48h,WT,Elm
AvrII digested DNMT 1A3L,WT,B.Oak
AvrII digested DNMT 1A,WT,B.Oak
AvrII digested DNMT3A13L,WT,B.Oak
AvrII digested DNMT3A1,WT,B.Oak
AvrII digested DNMT3A23L,WT,B.Oak
AvrII digested DNMT3A2,WT,B.Oak
AvrII digested DNMT3B1,WT,B.Oak
AvrII digested DNMT3L,WT,B.Oak
AvrII digested DNMT,WT,B.Oak
AvrII digested DNMT3B13L,WT,B.Oak
-2.33 -2.78 -0.79 0.12 -1.93 -1.57 -1.76 1.82 0.96 0.65 0.08 -0.29 -0.2 -1.01 -0.41 0.52 -0.31 0.13 -0.06 0.04 -0.12 -0.46 -0.17 -1.29 0.75 -0.06 0.52 0.21 0.4 -0.4 0.76 0.87 0.68 -0.0 0.8 1.09 0.48 0.39 0.16 -0.24 0.01 0.2 -0.28 0.88 0.82 -0.83 -0.05 -0.08 -0.02 0.06 -0.18 0.03 -0.41 -0.14 -0.81 -0.47 1.08 -0.68 -0.65 -0.69 0.82 -0.21 0.4 0.97 -0.33 -0.6 -0.14 -0.89 -0.26 0.5 -1.12 -0.95 -0.71 -0.67 -0.88 -0.17 -0.57 -0.41 -0.71 -0.46 -0.66 -0.19 -0.71 -0.59 -0.54 0.24 -0.47
-0.83 -0.86 -0.63 -0.6 -0.64 -0.09 -0.03 1.01 0.32 0.34 -0.62 -0.28 0.25 -0.54 -0.26 0.63 -0.34 -0.07 0.25 -0.53 -0.68 -0.31 0.03 -0.57 0.36 -0.15 -0.06 -0.2 0.41 -0.52 -0.15 0.5 0.27 -0.28 0.7 0.37 0.3 -0.11 0.18 -0.55 0.06 -0.37 -1.08 0.02 -0.38 0.25 0.41 0.2 0.27 0.21 0.36 0.56 0.47 0.37 0.07 0.22 0.11 -0.47 0.05 -0.25 0.43 -0.07 -0.02 0.52 0.2 -0.18 -0.07 0.05 0.04 0.24 0.13 -0.78 -0.36 -0.03 -0.73 -0.71 -0.8 -0.19 -0.0 -0.25 0.05 -0.15 0.1 0.13 0.16 0.49 -0.31

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.